RNA–Protein interactions for RNA: ENST00000429051.1

RCC1-208, Transcript of regulator of chromosome condensation 1, humanhuman

TSL 3

Gene RCC1, Length 538 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCC1-208ENST00000429051 ICAM3P32942 547 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 CHMP4BP1P59074 171 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 MRPS9P82933 396 aaKnown RBP13.22□□□□□ -0.29
RCC1-208ENST00000429051 NEDD9Q14511 834 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 MYSM1Q5VVJ2 828 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 WWC2Q6AWC2 1192 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 CDHR1Q96JP9 859 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 RNPC3Q96LT9 517 aaKnown RBP13.22□□□□□ -0.29
RCC1-208ENST00000429051 AGXT2Q9BYV1 514 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 TM6SF1Q9BZW5 370 aa13.22□□□□□ -0.29
RCC1-208ENST00000429051 V9GY48 417 aaPredicted RBP13.22□□□□□ -0.29
RCC1-208ENST00000429051 NOP56O00567 594 aaKnown RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 PPFIA4O75335 1185 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 FOSP01100 380 aaPredicted RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 CDC27P30260 824 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 ADD1P35611 737 aaKnown RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 ADCY7P51828 1080 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 AKAP17AQ02040 695 aaKnown RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 FUT2Q10981 343 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 C9orf50Q5SZB4 431 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 PSRC1Q6PGN9 363 aaPredicted RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 CCDC155Q8N6L0 562 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 C7orf31Q8N865 590 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 GIMAP8Q8ND71 665 aaPredicted RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 CCDC12Q8WUD4 166 aaPredicted RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 NOC4LQ9BVI4 516 aaKnown RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 ZSWIM6Q9HCJ5 1215 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 RIC8AQ9NPQ8 531 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 TRMT13Q9NUP7 481 aaKnown RBP13.21□□□□□ -0.29
RCC1-208ENST00000429051 BARHL2Q9NY43 387 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 RTEL1Q9NZ71 1219 aa13.21□□□□□ -0.29
RCC1-208ENST00000429051 SPATA31C2B4DYI2 1134 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 STXBP3O00186 592 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 F2P00734 622 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 HOXD8P13378 290 aaPredicted RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 CSF2RAP15509 400 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 CYP2C18P33260 490 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 SP2Q02086 613 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 UBE2SQ16763 222 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 PFKFB3Q16875 520 aaPredicted RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 HSDL1Q3SXM5 330 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 METTL7BQ6UX53 244 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 SESTD1Q86VW0 696 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 RPUSD2Q8IZ73 545 aaKnown RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 GPRASP2Q96D09 838 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 ZFP91Q96JP5 570 aaPredicted RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 SENP7Q9BQF6 1050 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 MTIF3Q9H2K0 278 aaKnown RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 IL23AQ9NPF7 189 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 FAM217BQ9NTX9 383 aaPredicted RBP13.2□□□□□ -0.3
RCC1-208ENST00000429051 PCDHA6Q9UN73 950 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 PCDHA8Q9Y5H6 950 aa13.2□□□□□ -0.3
RCC1-208ENST00000429051 SMCO2A6NFE2 343 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 PITPNM1O00562 1244 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 MAFGO15525 162 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 SORBS3O60504 671 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 ZNF286BP0CG31 522 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 SCG2P13521 617 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 PSEN2P49810 448 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 EPHB4P54760 987 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 CCL23P55773 120 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 EVCP57679 992 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 SMAD3P84022 425 aaKnown RBP13.19□□□□□ -0.3
RCC1-208ENST00000429051 AP3B2Q13367 1082 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 BFSP2Q13515 415 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 MFSD10Q14728 455 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 PTGISQ16647 500 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 KIAA0753Q2KHM9 967 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 MCTP2Q6DN12 878 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 RETREG2Q8NC44 543 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 KAT2BQ92831 832 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 BUD13Q9BRD0 619 aaKnown RBP eCLIP13.19□□□□□ -0.3
RCC1-208ENST00000429051 TANC1Q9C0D5 1861 aa13.19□□□□□ -0.3
RCC1-208ENST00000429051 PRPF3O43395 683 aaKnown RBP13.18□□□□□ -0.3
RCC1-208ENST00000429051 PFKMP08237 780 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 CYP2C9P11712 490 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 PDIA3P30101 505 aaKnown RBP13.18□□□□□ -0.3
RCC1-208ENST00000429051 RFC2P35250 354 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 ANAPC15P60006 121 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 MTMR1Q13613 665 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 CYFIP1Q7L576 1253 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 TRIM22Q8IYM9 498 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 DEFB123Q8N688 67 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 CAGE1Q8TC20 777 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 ALG1Q9BT22 464 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 RNF26Q9BY78 433 aaPredicted RBP13.18□□□□□ -0.3
RCC1-208ENST00000429051 C6orf50Q9HD87 102 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 ZNF215Q9UL58 517 aaPredicted RBP13.18□□□□□ -0.3
RCC1-208ENST00000429051 DOCK5Q9H7D0 1870 aa13.18□□□□□ -0.3
RCC1-208ENST00000429051 UMODL1Q5DID0 1318 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 ESYT2A0FGR8 921 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 HAS3O00219 553 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 CPLX1O14810 134 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 FGBP02675 491 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 IFNAR1P17181 557 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 GNA11P29992 359 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 SEMA3FQ13275 785 aa13.17□□□□□ -0.3
RCC1-208ENST00000429051 TOB2Q14106 344 aaPredicted RBP13.17□□□□□ -0.3
RCC1-208ENST00000429051 TMEM240Q5SV17 173 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms