RNA–Protein interactions for RNA: ENST00000428983.2

PCDH8P1-201, Transcript of protocadherin 8 pseudogene 1, humanhuman

BASIC

Gene PCDH8P1, Length 2,773 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8P1-201ENST00000428983 DNA2P51530 1060 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 TTI2Q6NXR4 508 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 REXO1Q8N1G1 1221 aaKnown RBP18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 PROM2Q8N271 834 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 MMGT1Q8N4V1 131 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 MS4A14Q96JA4 679 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 TRIM9Q9C026 710 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 FAM107BQ9H098 131 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 C6orf50Q9HD87 102 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 USP40Q9NVE5 1235 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 NAV1Q8NEY1 1877 aa18.66■□□□□ 0.58
PCDH8P1-201ENST00000428983 ANO9A1A5B4 782 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 EPHB6O15197 1021 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 EEF1GP26641 437 aaKnown RBP18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 VAV2P52735 878 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 KCNK18Q7Z418 384 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 CCDC42Q96M95 316 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 ZIM3Q96PE6 472 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 MTMR4Q9NYA4 1195 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 SALL4Q9UJQ4 1053 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 FAM153BP0C7A2 387 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 GUCY1A3Q02108 690 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 FAM153CQ494X1 144 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 SWT1Q5T5J6 900 aaKnown RBP18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 HAUS3Q68CZ6 603 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 OSBPL9Q96SU4 736 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 SPZ1Q9BXG8 430 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 FAM153AQ9UHL3 310 aa18.65■□□□□ 0.58
PCDH8P1-201ENST00000428983 GOLGA8KD6RF30 607 aa18.64■□□□□ 0.58
PCDH8P1-201ENST00000428983 CACNB1Q02641 598 aaPredicted RBP18.64■□□□□ 0.58
PCDH8P1-201ENST00000428983 CCDC70Q6NSX1 233 aa18.64■□□□□ 0.58
PCDH8P1-201ENST00000428983 PPEF1O14829 653 aaPredicted RBP18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 ZBED6P86452 979 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 ECM1Q16610 540 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 CEP89Q96ST8 783 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 IFIH1Q9BYX4 1025 aaKnown RBP18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 KANSL2Q9H9L4 492 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 RBM12Q9NTZ6 932 aaKnown RBP18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 TBC1D7Q9P0N9 293 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 CDK5RAP2Q96SN8 1893 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L10C9JJH3 530 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 ZNF662Q6ZS27 426 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 C2CD5Q86YS7 1000 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 KIAA0825Q8IV33 1275 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 KIAA0895Q8NCT3 520 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 GIMAP8Q8ND71 665 aaPredicted RBP18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 CNOT6LQ96LI5 555 aaKnown RBP18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 RUFY1Q96T51 708 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 CCSER1Q9C0I3 900 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 THAP9Q9H5L6 903 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 ARHGAP20Q9P2F6 1191 aa18.64■□□□□ 0.57
PCDH8P1-201ENST00000428983 MTIF2P46199 727 aaKnown RBP18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 NNTQ13423 1086 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 SPA17Q15506 151 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 TRADDQ15628 312 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 CCDC155Q8N6L0 562 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 DAGLBQ8NCG7 672 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 CERKQ8TCT0 537 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 RNPC3Q96LT9 517 aaKnown RBP18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 PCDHA13Q9Y5I0 950 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 MYH1P12882 1939 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 PSMA7O14818 248 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 SEC24CP53992 1094 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 MIIPQ5JXC2 388 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 IQCEQ6IPM2 695 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 ADGRF4Q8IZF3 695 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 ZC3H12CQ9C0D7 883 aaKnown RBP18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 ZNF287Q9HBT7 754 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 FAM207AQ9NSI2 230 aaPredicted RBP18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 STIM2Q9P246 746 aa18.63■□□□□ 0.57
PCDH8P1-201ENST00000428983 PCNTO95613 3336 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 MAST2Q6P0Q8 1798 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 MYMKA6NI61 221 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L15C9J2P7 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L13C9JLJ4 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L11C9JVI0 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L18D6R9N7 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L22D6RA61 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L17D6RBQ6 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L19D6RCP7 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L20D6RJB6 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 BUB1O43683 1085 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 OPA1O60313 960 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 BBOX1O75936 387 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 RHOBTB3O94955 611 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 SSBP05455 408 aaKnown RBP eCLIP18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 GLI1P08151 1106 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 GNA11P29992 359 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 CARSP49589 748 aaKnown RBP18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L24Q0WX57 530 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 GRB10Q13322 594 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 CALCRLQ16602 461 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 CCDC181Q5TID7 509 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 USP17L6PQ6QN14 398 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 KRT25Q7Z3Z0 450 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 CCDC170Q8IYT3 715 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 IFT81Q8WYA0 676 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 NOC4LQ9BVI4 516 aaKnown RBP18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 NFU1Q9UMS0 254 aa18.62■□□□□ 0.57
PCDH8P1-201ENST00000428983 H0YHG0 523 aa18.62■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms