RNA–Protein interactions for RNA: ENST00000428014.1

SMC1A-203, Transcript of structural maintenance of chromosomes 1A, humanhuman

TSL 3

Gene SMC1A, Length 868 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1A-203ENST00000428014 RBL2Q08999 1139 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 NTRK3Q16288 839 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 CPLX2Q6PUV4 134 aaKnown RBP10.5□□□□□ -0.73
SMC1A-203ENST00000428014 Q6ZUG5 572 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 NIPA1Q7RTP0 329 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 FAM126BQ8IXS8 530 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 CCDC148Q8NFR7 591 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 BICD2Q8TD16 824 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 TBC1D5Q92609 795 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 BRF1Q92994 677 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 MTG1Q9BT17 334 aaPredicted RBP10.5□□□□□ -0.73
SMC1A-203ENST00000428014 C22orf23Q9BZE7 217 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 PDLIM7Q9NR12 457 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 PDGFCQ9NRA1 345 aa10.5□□□□□ -0.73
SMC1A-203ENST00000428014 SPDYE3A6NKU9 549 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 SPATA31C2B4DYI2 1134 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 CDKL5O76039 1030 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 RPLP2P05387 115 aaKnown RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 SCG2P13521 617 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 PDIA3P30101 505 aaKnown RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 CLK2P49760 499 aaKnown RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 TLE2Q04725 743 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 ARHGAP1Q07960 439 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 ITGA7Q13683 1181 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 COL9A3Q14050 684 aaPredicted RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 TOB2Q14106 344 aaPredicted RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 DGKDQ16760 1214 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 CELF3Q5SZQ8 465 aaKnown RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 IER5LQ5T953 404 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 MYSM1Q5VVJ2 828 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 METTL7BQ6UX53 244 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 NLRX1Q86UT6 975 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 C7orf61Q8IZ16 206 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 OR6J1Q8NGC5 347 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 SMARCC2Q8TAQ2 1214 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 PURBQ96QR8 312 aaKnown RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 LBHD1Q9BQE6 289 aaPredicted RBP10.49□□□□□ -0.73
SMC1A-203ENST00000428014 MYL10Q9BUA6 226 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 MRVI1Q9Y6F6 885 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 LTBP2Q14767 1821 aa10.49□□□□□ -0.73
SMC1A-203ENST00000428014 MYADML2A6NDP7 307 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 STXBP3O00186 592 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 HAS3O00219 553 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 F2P00734 622 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TIMP1P01033 207 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 PFKMP08237 780 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 CYP3A4P08684 503 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 EIF2AK2P19525 551 aaKnown RBP10.48□□□□□ -0.73
SMC1A-203ENST00000428014 CDC27P30260 824 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 SREBF1P36956 1147 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 MRPS9P82933 396 aaKnown RBP10.48□□□□□ -0.73
SMC1A-203ENST00000428014 FAAP100Q0VG06 881 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TRIM60Q495X7 471 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 ANO1Q5XXA6 986 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 WWC2Q6AWC2 1192 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 NOL8Q76FK4 1167 aaKnown RBP10.48□□□□□ -0.73
SMC1A-203ENST00000428014 EEPD1Q7L9B9 569 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TRIM22Q8IYM9 498 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TDHQ8IZJ6 230 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 CRYGNQ8WXF5 182 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 LRRC2Q9BYS8 371 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TSHZ2Q9NRE2 1034 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 COLQQ9Y215 455 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-203ENST00000428014 V9GY48 417 aaPredicted RBP10.48□□□□□ -0.73
SMC1A-203ENST00000428014 STK36Q9NRP7 1315 aa10.48□□□□□ -0.73
SMC1A-203ENST00000428014 TMEM265A0A087WTH1 108 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 CAND2O75155 1236 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 PPP1R37O75864 691 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 ARIH2O95376 493 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 MMP3P08254 477 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 HOXA13P31271 388 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 HOXC8P31273 242 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 CIITAP33076 1130 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 RFC2P35250 354 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 ADD1P35611 737 aaKnown RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 MAGEA10P43363 369 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 NAPAP54920 295 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 AKAP17AQ02040 695 aaKnown RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 PKN1Q16512 942 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 MFSD5Q6N075 450 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 DAGLBQ8NCG7 672 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 TNPO1Q92973 898 aaKnown RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 LENG1Q96BZ8 264 aaPredicted RBP10.47□□□□□ -0.73
SMC1A-203ENST00000428014 C6orf50Q9HD87 102 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 ATP11BQ9Y2G3 1177 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 UBIAD1Q9Y5Z9 338 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 NFASCO94856 1347 aa10.47□□□□□ -0.73
SMC1A-203ENST00000428014 DEXIO95424 95 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 SLC34A2O95436 690 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 RXRAP19793 462 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 UBA1P22314 1058 aaKnown RBP10.46□□□□□ -0.73
SMC1A-203ENST00000428014 ADCY7P51828 1080 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 IRX5P78411 483 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-203ENST00000428014 APOBRQ0VD83 1088 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 FAM109BQ6ICB4 259 aaPredicted RBP10.46□□□□□ -0.73
SMC1A-203ENST00000428014 USP17L6PQ6QN14 398 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 MOXD1Q6UVY6 613 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 CXCL17Q6UXB2 119 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 SEPT14Q6ZU15 432 aa10.46□□□□□ -0.73
SMC1A-203ENST00000428014 HEATR3Q7Z4Q2 680 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms