RNA–Protein interactions for RNA: ENST00000427635.6

HERC4-206, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 6,391 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-206ENST00000427635 TRPV6Q9H1D0 765 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 COG4Q9H9E3 785 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 GDPD2Q9HCC8 539 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 MAN1C1Q9NR34 630 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SMYD2Q9NRG4 433 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 LARSQ9P2J5 1176 aaKnown RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 INTUQ9ULD6 942 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TROVE2P10155 538 aaKnown RBP eCLIP6.21□□□□□ -1.42
HERC4-206ENST00000427635 STAT1P42224 750 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 ATXN3P54252 364 aaPredicted RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 PDE1AP54750 535 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 PPP2R3AQ06190 1150 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 KARSQ15046 597 aaKnown RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 ASPRV1Q53RT3 343 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 USP17L2Q6R6M4 530 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 PEX26Q7Z412 305 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 IFT20Q8IY31 132 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 PDZD8Q8NEN9 1154 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TRIM11Q96F44 468 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SYTL2Q9HCH5 934 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TMEM51Q9NW97 253 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 CUTAO60888 179 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SEC24BO95487 1268 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TTLL1O95922 423 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 EVCP57679 992 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 PTK2Q05397 1052 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 LONRF2Q1L5Z9 754 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TWF2Q6IBS0 349 aaKnown RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 LRRC31Q6UY01 552 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SCN4BQ8IWT1 228 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 BBOF1Q8ND07 529 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 MCUQ8NE86 351 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 HELQQ8TDG4 1101 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 ORAI2Q96SN7 254 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 EYA1Q99502 592 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 RAB17Q9H0T7 212 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 TYW1Q9NV66 732 aaKnown RBP6.21□□□□□ -1.42
HERC4-206ENST00000427635 RGL1Q9NZL6 768 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 DNAI1Q9UI46 699 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 MAD1L1Q9Y6D9 718 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 CFAP74Q9C0B2 1584 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 SBNO1A3KN83 1393 aa6.21□□□□□ -1.42
HERC4-206ENST00000427635 HNRNPDLO14979 420 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 TTI1O43156 1089 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CHEK2O96017 543 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 RALAP11233 206 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 MYL7Q01449 175 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 PHKG1Q16816 387 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 BMP2KLQ5H9B9 411 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 SYDE2Q5VT97 1194 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 RWDD4Q6NW29 188 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 ANGPTL8Q6UXH0 198 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CCDC186Q7Z3E2 898 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 NT5DC4Q86YG4 428 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 LMNTD2Q8IXW0 634 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 FGD4Q96M96 766 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TCEANC2Q96MN5 208 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 NUDCD1Q96RS6 583 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CENPKQ9BS16 269 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 VPS16Q9H269 839 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 LSM7Q9UK45 103 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 PPP1R9AQ9ULJ8 1098 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TRIM17Q9Y577 477 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TOP2BQ02880 1626 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 FAM200BP0CF97 657 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CPB1P15086 417 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CRKLP46109 303 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 PDE1CQ14123 709 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 TTLL4Q14679 1199 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 C8orf74Q6P047 294 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 MRPL50Q8N5N7 158 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 U2AF1L4Q8WU68 220 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 ITFG2Q969R8 447 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 FAM167AQ96KS9 214 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ZSCAN10Q96SZ4 725 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 BAG1Q99933 345 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 STRIP2Q9ULQ0 834 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ABCC10Q5T3U5 1492 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 LOC102724428A0A0B4J2F2 783 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 PRPF4O43172 522 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERC4-206ENST00000427635 GPC4O75487 556 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ARHGDIAP52565 204 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 SIK1P57059 783 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 HDLBPQ00341 1268 aaKnown RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 MTMR3Q13615 1198 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 DCAF4L1Q3SXM0 396 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 BEND3Q5T5X7 828 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TTC19Q6DKK2 380 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 KLC3Q6P597 504 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 NR1H4Q96RI1 486 aaPredicted RBP6.2□□□□□ -1.42
HERC4-206ENST00000427635 BUD13Q9BRD0 619 aaKnown RBP eCLIP6.2□□□□□ -1.42
HERC4-206ENST00000427635 KATNAL1Q9BW62 490 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 WDR11Q9BZH6 1224 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 DRC3Q9H069 523 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 TRPC7Q9HCX4 862 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 PIK3C2GO75747 1445 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 ATP10DQ9P241 1426 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 IRF6O14896 467 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 C21orf2O43822 256 aa6.2□□□□□ -1.42
HERC4-206ENST00000427635 CEP104O60308 925 aa6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms