RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 ERMNQ8TAM6 284 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 HOOK2Q96ED9 719 aa24.29■■□□□ 1.48
CNEP1R1-202ENST00000427478 PLA2G4BP0C869 781 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 APOBEC3FQ8IUX4 373 aaKnown RBP24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 WDR18Q9BV38 432 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 VAV3Q9UKW4 847 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 FZD1Q9UP38 647 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 RBBP6Q7Z6E9 1792 aaKnown RBP24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 CATSPER3Q86XQ3 398 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 DNAJC19Q96DA6 116 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 EHMT1Q9H9B1 1298 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 GPRC5DQ9NZD1 345 aa24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 MAGEC2Q9UBF1 373 aaPredicted RBP24.28■■□□□ 1.48
CNEP1R1-202ENST00000427478 PARP14Q460N5 1801 aa24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 UQCRHLA0A096LP55 91 aa24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 UQCRHP07919 91 aa24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 EEF1GP26641 437 aaKnown RBP24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 NOC3LQ8WTT2 800 aaKnown RBP24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 EEF2KMTQ96G04 330 aa24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 PRIMPOLQ96LW4 560 aa24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 BAG1Q99933 345 aaPredicted RBP24.27■■□□□ 1.48
CNEP1R1-202ENST00000427478 VCAM1P19320 739 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 RBL2Q08999 1139 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 CEP135Q66GS9 1140 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 PPFIBP1Q86W92 1011 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 CPXCR1Q8N123 301 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 WRNIP1Q96S55 665 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 ITIH6Q6UXX5 1313 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 SBF1O95248 1867 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 AKR1B15C9JRZ8 316 aaPredicted RBP24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 FLOT1O75955 427 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 TPM2P07951 284 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 EHHADHQ08426 723 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 COASYQ13057 564 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 NYAP1Q6ZVC0 841 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 GPBP1Q86WP2 473 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 SCYL3Q8IZE3 742 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 CPLX3Q8WVH0 158 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZKSCAN4Q969J2 545 aaPredicted RBP24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZFP91Q96JP5 570 aaPredicted RBP24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 PPP1R13BQ96KQ4 1090 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 SEMA6BQ9H3T3 888 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 BMP2KQ9NSY1 1161 aaPredicted RBP24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 EMILIN3Q9NT22 766 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 GGA3Q9NZ52 723 aa24.26■■□□□ 1.47
CNEP1R1-202ENST00000427478 RPA1P27694 616 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 SPP2Q13103 211 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 PTPN14Q15678 1187 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 PANK4Q9NVE7 773 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 MEIS1O00470 390 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 NFIBO00712 420 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 SPATA31C1P0DKV0 1188 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 LMNB1P20700 586 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 SLC30A10Q6XR72 485 aa24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 RPAP3Q9H6T3 665 aaPredicted RBP24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 RAVER2Q9HCJ3 691 aaKnown RBP24.25■■□□□ 1.47
CNEP1R1-202ENST00000427478 NPHP3-ACAD11A0A0J9YXS1 232 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 ARHGAP6O43182 974 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 HSD17B4P51659 736 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 UBXN1Q04323 297 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 PSMD2Q13200 908 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 CENPPQ6IPU0 288 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 GPC2Q8N158 579 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 GLIS3Q8NEA6 775 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZBTB4Q9P1Z0 1013 aaPredicted RBP24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZNF112Q9UJU3 913 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 PHIPQ8WWQ0 1821 aa24.24■■□□□ 1.47
CNEP1R1-202ENST00000427478 ALAS1P13196 640 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 CYP11B2P19099 503 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 SLC12A3P55017 1021 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 PSMC6P62333 389 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 CACNB1Q02641 598 aaPredicted RBP24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 CYP4A11Q02928 519 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 LRRC41Q15345 812 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 GUF1Q8N442 669 aaKnown RBP24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 CLEC4DQ8WXI8 215 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 CNOT6LQ96LI5 555 aaKnown RBP24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 SLC38A10Q9HBR0 1119 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 PICK1Q9NRD5 415 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 STK24Q9Y6E0 443 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 EML1O00423 815 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 PES1O00541 588 aaKnown RBP24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 STX10O60499 249 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 GYPCP04921 128 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 EPS15P42566 896 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 USP14P54578 494 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 RAD51AP2Q09MP3 1159 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 LRCH2Q5VUJ6 765 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 HOMER2Q9NSB8 354 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 PPP1R9AQ9ULJ8 1098 aa24.23■■□□□ 1.47
CNEP1R1-202ENST00000427478 LGALS16A8MUM7 142 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 CASP14P31944 242 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 CEP55Q53EZ4 464 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 FAM114A1Q8IWE2 563 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 MYRIPQ8NFW9 859 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 ZNF592Q92610 1267 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 EIF2AK1Q9BQI3 630 aaKnown RBP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 COL20A1Q9P218 1284 aa24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 POLR2AP24928 1970 aaKnown RBP24.22■■□□□ 1.47
CNEP1R1-202ENST00000427478 CHMP2AO43633 222 aa24.22■■□□□ 1.47
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms