RNA–Protein interactions for RNA: ENST00000427414.2

SH3D19-204, Transcript of SH3 domain containing 19, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SH3D19, Length 2,656 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3D19-204ENST00000427414 PROCA1Q8NCQ7 364 aaPredicted RBP9.54□□□□□ -0.88
SH3D19-204ENST00000427414 TRPM4Q8TD43 1214 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 EMILIN3Q9NT22 766 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 TMEM260Q9NX78 707 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 HOXC10Q9NYD6 342 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 GGA3Q9NZ52 723 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 RNF181Q9P0P0 153 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 AFG3L2Q9Y4W6 797 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 OTOFQ9HC10 1997 aa9.54□□□□□ -0.88
SH3D19-204ENST00000427414 SHTN1A0MZ66 631 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 GLTPD2A6NH11 291 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L15C9J2P7 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L13C9JLJ4 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L11C9JVI0 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L18D6R9N7 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L22D6RA61 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L17D6RBQ6 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L19D6RCP7 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L20D6RJB6 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 OPLAHO14841 1288 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 TNNT3P45378 269 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP17L24Q0WX57 530 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 PAXIP1Q6ZW49 1069 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 LDHDQ86WU2 507 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 SULF1Q8IWU6 871 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 ETNPPLQ8TBG4 499 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 DHX58Q96C10 678 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 POLR3CQ9BUI4 534 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 ZCCHC17Q9NP64 241 aaKnown RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 LRWD1Q9UFC0 647 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 PCDHA12Q9UN75 941 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 PTPRFP10586 1907 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 ZNF536O15090 1300 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 A0A087X0B3 334 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 USP2O75604 605 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 DSG3P32926 999 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 FKBP1BP68106 108 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 GPS2Q13227 327 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 PNOCQ13519 176 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 NCAPHQ15003 741 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 SHROOM1Q2M3G4 852 aaPredicted RBP9.53□□□□□ -0.88
SH3D19-204ENST00000427414 C9orf131Q5VYM1 1079 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 CATSPERGQ6ZRH7 1159 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 HAS1Q92839 578 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 RIT2Q99578 217 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 WDR11Q9BZH6 1224 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 TMOD4Q9NZQ9 345 aa9.53□□□□□ -0.88
SH3D19-204ENST00000427414 IRF6O14896 467 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 VCAM1P19320 739 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 EPS15P42566 896 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 SPAG1Q07617 926 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 PPP2R5CQ13362 524 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 COG2Q14746 738 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 DPCR1Q3MIW9 517 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 NAALADL2Q58DX5 795 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 POTEDQ86YR6 584 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 REPS2Q8NFH8 660 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 DHTKD1Q96HY7 919 aaPredicted RBP9.52□□□□□ -0.88
SH3D19-204ENST00000427414 CTAGE1Q96RT6 745 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 WRNIP1Q96S55 665 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 MMTAG2Q9BU76 263 aaKnown RBP9.52□□□□□ -0.88
SH3D19-204ENST00000427414 CARD6Q9BX69 1037 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 TUFT1Q9NNX1 390 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 KCND2Q9NZV8 630 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 RWDD2AQ9UIY3 292 aa9.52□□□□□ -0.88
SH3D19-204ENST00000427414 BAZ2BQ9UIF8 2168 aaKnown RBP9.52□□□□□ -0.89
SH3D19-204ENST00000427414 CCP110O43303 1012 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 KCNJ6P48051 423 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 STIM1Q13586 685 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 SPATA1Q5VX52 437 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 PCNX4Q63HM2 1172 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 USP49Q70CQ1 688 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 SV2BQ7L1I2 683 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 RDM1Q8NG50 284 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 SLC5A5Q92911 643 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 NUP88Q99567 741 aaPredicted RBP9.52□□□□□ -0.89
SH3D19-204ENST00000427414 KCNH4Q9UQ05 1017 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 SLC45A1Q9Y2W3 748 aa9.52□□□□□ -0.89
SH3D19-204ENST00000427414 BIN1O00499 593 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 SLC37A4O43826 429 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 RPN1P04843 607 aaKnown RBP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 TPM1P09493 284 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 YBX3P16989 372 aaKnown RBP eCLIP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 RPA1P27694 616 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 OAS2P29728 719 aaKnown RBP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CUL4BQ13620 913 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 UBE2SQ16763 222 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 ANKRD13AQ8IZ07 590 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CHST13Q8NET6 341 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CLEC4DQ8WXI8 215 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 LENG9Q96B70 501 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 SRRTQ9BXP5 876 aaKnown RBP9.51□□□□□ -0.89
SH3D19-204ENST00000427414 EPC1Q9H2F5 836 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 FBXO40Q9UH90 709 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 CCPG1Q9ULG6 757 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 PHLPP2Q6ZVD8 1323 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 IGLV3-22A0A075B6J6 115 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 EFCAB8A8MWE9 144 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 MEIS1O00470 390 aa9.51□□□□□ -0.89
SH3D19-204ENST00000427414 VWA5AO00534 786 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms