RNA–Protein interactions for RNA: ENST00000425072.5

MDC1-205, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 3

Gene MDC1, Length 582 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-205ENST00000425072 TBC1D22BQ9NU19 505 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 DDX19AQ9NUU7 478 aaKnown RBP11.66□□□□□ -0.54
MDC1-205ENST00000425072 LRWD1Q9UFC0 647 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 CPA4Q9UI42 421 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 HOOK1Q9UJC3 728 aaKnown RBP11.66□□□□□ -0.54
MDC1-205ENST00000425072 KCNH3Q9ULD8 1083 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 UBIAD1Q9Y5Z9 338 aa11.66□□□□□ -0.54
MDC1-205ENST00000425072 DNAJC25-GNG10A0A024R161 153 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 A0A1B0GVL5 298 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 FOXN1O15353 648 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 PEX10O60683 326 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 KINO60870 393 aaKnown RBP11.65□□□□□ -0.54
MDC1-205ENST00000425072 ZNF202O95125 648 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 TGFB3P10600 412 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 SYKP43405 635 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 UBXN2AP68543 259 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 PDE4DQ08499 809 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 KRT79Q5XKE5 535 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 SHC4Q6S5L8 630 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 ZNF467Q7Z7K2 595 aaPredicted RBP11.65□□□□□ -0.54
MDC1-205ENST00000425072 KCTD17Q8N5Z5 321 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 ERMNQ8TAM6 284 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 HAS1Q92839 578 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 GPRASP2Q96D09 838 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 SDF4Q9BRK5 362 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 ZNF577Q9BSK1 485 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 WDR11Q9BZH6 1224 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 PORCNQ9H237 461 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 KCNMB3Q9NPA1 279 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 A0A0G2JMZ2 1700 aa11.65□□□□□ -0.54
MDC1-205ENST00000425072 IGLV3-22A0A075B6J6 115 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 SOWAHBA6NEL2 793 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 IPO5O00410 1097 aaKnown RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 MSH4O15457 936 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 SLC37A4O43826 429 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 AOC2O75106 756 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 ALDH5A1P51649 535 aaPredicted RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 MRPS9P82933 396 aaKnown RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 CNTN2Q02246 1040 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 CRHR2Q13324 411 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 MTMR1Q13613 665 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 KIF22Q14807 665 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 ARHGEF6Q15052 776 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 IL17AQ16552 155 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 GPR142Q7Z601 462 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 ELOA2Q8IYF1 753 aaPredicted RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 FMR1NBQ8N0W7 255 aaPredicted RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 MSL3Q8N5Y2 521 aaKnown RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 IGSF22Q8N9C0 903 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 IQUBQ8NA54 791 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 GIMAP8Q8ND71 665 aaPredicted RBP11.64□□□□□ -0.55
MDC1-205ENST00000425072 ENGASEQ8NFI3 743 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 CYP2W1Q8TAV3 490 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 ETNPPLQ8TBG4 499 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 SLC5A5Q92911 643 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 CALML4Q96GE6 196 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 CFHR5Q9BXR6 569 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 KCNH7Q9NS40 1196 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 DACT1Q9NYF0 836 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 TCEAL9Q9UHQ7 104 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 HPSEQ9Y251 543 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 MRVI1Q9Y6F6 885 aa11.64□□□□□ -0.55
MDC1-205ENST00000425072 ADGRA2Q96PE1 1338 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 SPATA31C2B4DYI2 1134 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 POLR2DO15514 142 aaKnown RBP11.63□□□□□ -0.55
MDC1-205ENST00000425072 GAS7O60861 476 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 ARP10275 920 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 PFKFB1P16118 471 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 ITGB5P18084 799 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 LIG1P18858 919 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 ADORA2AP29274 412 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 ICAM3P32942 547 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 VEGFBP49765 207 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 NDUFA8P51970 172 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 SNW1Q13573 536 aaKnown RBP11.63□□□□□ -0.55
MDC1-205ENST00000425072 ZNF792Q3KQV3 632 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 CCDC183Q5T5S1 534 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 LRCH2Q5VUJ6 765 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 RRAGBQ5VZM2 374 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 OTOP1Q7RTM1 612 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 RASSF8Q8NHQ8 419 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 LENG9Q96B70 501 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 EPSTI1Q96J88 318 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 INPP4AQ96PE3 977 aaPredicted RBP11.63□□□□□ -0.55
MDC1-205ENST00000425072 PURBQ96QR8 312 aaKnown RBP11.63□□□□□ -0.55
MDC1-205ENST00000425072 ZIC5Q96T25 663 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 NUDT12Q9BQG2 462 aa11.63□□□□□ -0.55
MDC1-205ENST00000425072 RBBP6Q7Z6E9 1792 aaKnown RBP11.62□□□□□ -0.55
MDC1-205ENST00000425072 NR1I2O75469 434 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 PSMD10O75832 226 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 PGK2P07205 417 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 MUTP22033 750 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 EDNRBP24530 442 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 VASPP50552 380 aaPredicted RBP11.62□□□□□ -0.55
MDC1-205ENST00000425072 FCGRTP55899 365 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 GRIN1Q05586 938 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 GRB14Q14449 540 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 SPECC1Q5M775 1068 aa11.62□□□□□ -0.55
MDC1-205ENST00000425072 CAVIN1Q6NZI2 390 aaKnown RBP11.62□□□□□ -0.55
MDC1-205ENST00000425072 MAMDC4Q6UXC1 1216 aa11.62□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 261 ms