RNA–Protein interactions for RNA: ENST00000423026.6

SNX20-203, Transcript of sorting nexin 20, humanhuman

TSL 1 (best) BASIC

Gene SNX20, Length 2,156 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX20-203ENST00000423026 TEX33O43247 280 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 SSBP05455 408 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX20-203ENST00000423026 TNNT1P13805 278 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 TAL1P17542 331 aaPredicted RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 COPB1P53618 953 aaKnown RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 USP14P54578 494 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 STK4Q13043 487 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 PTPN14Q15678 1187 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 NCAPH2Q6IBW4 605 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 CCAR2Q8N163 923 aaKnown RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 CSGALNACT2Q8N6G5 542 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 DDX12PQ92771 950 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 C16orf45Q96MC5 204 aaPredicted RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 SLF1Q9BQI6 1058 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 SRRTQ9BXP5 876 aaKnown RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 FBXO28Q9NVF7 368 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 CALCOCO1Q9P1Z2 691 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 PNMA2Q9UL42 364 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 CCPG1Q9ULG6 757 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 RABGAP1Q9Y3P9 1069 aa10.07□□□□□ -0.8
SNX20-203ENST00000423026 CTDP1Q9Y5B0 961 aaPredicted RBP10.07□□□□□ -0.8
SNX20-203ENST00000423026 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.07□□□□□ -0.8
SNX20-203ENST00000423026 TRIM49BA6NDI0 452 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 AKR1B15C9JRZ8 316 aaPredicted RBP10.06□□□□□ -0.8
SNX20-203ENST00000423026 FAM86B1E9PN63 330 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 KIF2AO00139 706 aaPredicted RBP10.06□□□□□ -0.8
SNX20-203ENST00000423026 FGFR1OPO95684 399 aaKnown RBP10.06□□□□□ -0.8
SNX20-203ENST00000423026 ICAM1P05362 532 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 FAM86B2P0C5J1 330 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 ECM1Q16610 540 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 PTPN21Q16825 1174 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 NBPF12Q5TAG4 269 aaPredicted RBP10.06□□□□□ -0.8
SNX20-203ENST00000423026 MCF2L2Q86YR7 1114 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 NLGN2Q8NFZ4 835 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 UIMC1Q96RL1 719 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 BAG1Q99933 345 aaPredicted RBP10.06□□□□□ -0.8
SNX20-203ENST00000423026 VPS16Q9H269 839 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 TMX1Q9H3N1 280 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 AS3MTQ9HBK9 375 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 SLC39A2Q9NP94 309 aa10.06□□□□□ -0.8
SNX20-203ENST00000423026 MSH4O15457 936 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ARHGAP6O43182 974 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PLA2G4BP0C869 781 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 FCER1AP12319 257 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 INPP5BP32019 993 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TTI2Q6NXR4 508 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ARHGAP27Q6ZUM4 889 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 KCNK18Q7Z418 384 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 CCDC65Q8IXS2 484 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ZNF397Q8NF99 534 aaPredicted RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 LENG9Q96B70 501 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TANGO6Q9C0B7 1094 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TSPYL1Q9H0U9 437 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PICK1Q9NRD5 415 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TRMT1Q9NXH9 659 aaKnown RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 FAM53CQ9NYF3 392 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TAB2Q9NYJ8 693 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 DNM3Q9UQ16 869 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ASTN2O75129 1339 aaPredicted RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 ITIH6Q6UXX5 1313 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ZNF541Q9H0D2 1346 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 POTEB3A0JP26 581 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 POTECB2RU33 542 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 STX10O60499 249 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 KRT18P05783 430 aaKnown RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 FDX1P10109 184 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 RPA1P27694 616 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PBX1P40424 430 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 STAT3P40763 770 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PRELPP51888 382 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PMS1P54277 932 aaKnown RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 TRIM14Q14142 442 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 ANGEL2Q5VTE6 544 aaKnown RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 POTEBQ6S5H4 581 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 GUF1Q8N442 669 aaKnown RBP10.05□□□□□ -0.8
SNX20-203ENST00000423026 KCTD17Q8N5Z5 321 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TC2NQ8N9U0 490 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 KIAA0895Q8NCT3 520 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 TBC1D5Q92609 795 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 PANK4Q9NVE7 773 aa10.05□□□□□ -0.8
SNX20-203ENST00000423026 E9PMD0 336 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 PES1O00541 588 aaKnown RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 ZSCAN12O43309 604 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 MED24O75448 989 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 FLOT1O75955 427 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 TUBB4AP04350 444 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 LMNB1P20700 586 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 ADKP55263 362 aaKnown RBP10.04□□□□□ -0.8
SNX20-203ENST00000423026 UBXN1Q04323 297 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 SPIRE1Q08AE8 756 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CEP135Q66GS9 1140 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 ANKRD40Q6AI12 368 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CENPPQ6IPU0 288 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CNGA4Q8IV77 575 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 SCYL3Q8IZE3 742 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 GPC2Q8N158 579 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 SAMD3Q8N6K7 520 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 CCDC51Q96ER9 411 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 AGBL1Q96MI9 1066 aa10.04□□□□□ -0.8
SNX20-203ENST00000423026 PANX2Q96RD6 677 aa10.04□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms