RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 PDIA5Q14554 519 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 ZRSR1Q15695 479 aaKnown RBP19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 GNPTABQ3T906 1256 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 KRT79Q5XKE5 535 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 CABP7Q86V35 215 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 REM2Q8IYK8 340 aaPredicted RBP19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 CEP57L1Q8IYX8 460 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 PDILTQ8N807 584 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 ENGASEQ8NFI3 743 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 ERMNQ8TAM6 284 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 CYP2W1Q8TAV3 490 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 HAS1Q92839 578 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 PURBQ96QR8 312 aaKnown RBP19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 USP25Q9UHP3 1055 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 STK24Q9Y6E0 443 aa19.3■□□□□ 0.68
CCDC28B-202ENST00000421922 MEIS1O00470 390 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 GAS7O60861 476 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 BCRP11274 1271 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 CNTN2Q02246 1040 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 STXBP2Q15833 593 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 CAMK4Q16566 473 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 LRCH2Q5VUJ6 765 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 IGSF22Q8N9C0 903 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 CNNM3Q8NE01 707 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 LENG9Q96B70 501 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 ZFP91Q96JP5 570 aaPredicted RBP19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 CDHR1Q96JP9 859 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 TIGD1Q96MW7 591 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 UIMC1Q96RL1 719 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 JADE2Q9NQC1 790 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 UBIAD1Q9Y5Z9 338 aa19.29■□□□□ 0.68
CCDC28B-202ENST00000421922 POTEMA6NI47 508 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 STRNO43815 780 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 TM4SF4P48230 202 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 KANK3Q6NY19 840 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 USP49Q70CQ1 688 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 VSIG10LQ86VR7 867 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 IQUBQ8NA54 791 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 SNX29Q8TEQ0 813 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 DHX58Q96C10 678 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 TEKT3Q9BXF9 490 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 PANK2Q9BZ23 570 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 WDR11Q9BZH6 1224 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 CCSER1Q9C0I3 900 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 PLXNA1Q9UIW2 1896 aa19.28■□□□□ 0.68
CCDC28B-202ENST00000421922 PP2D1A8MPX8 630 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 IPO5O00410 1097 aaKnown RBP19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 TLR2O60603 784 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 PGK2P07205 417 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 ITGB5P18084 799 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 STAT6P42226 847 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 CTCFP49711 727 aaPredicted RBP19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 VEGFBP49765 207 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 MRPS9P82933 396 aaKnown RBP19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 RRAGBQ5VZM2 374 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 HAUS3Q68CZ6 603 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 NCAPH2Q6IBW4 605 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 PLEKHH3Q7Z736 793 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 ABRAQ8N0Z2 381 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 FAM133AQ8N9E0 248 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 GPRASP2Q96D09 838 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 KIAA1217Q5T5P2 1943 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 ADGRA2Q96PE1 1338 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 KDM3AQ9Y4C1 1321 aa19.27■□□□□ 0.68
CCDC28B-202ENST00000421922 SYCE3A1L190 88 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 SLC34A2O95436 690 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 ARP10275 920 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 CDC25AP30304 524 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 KARSQ15046 597 aaKnown RBP19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 KRBA2Q6ZNG9 492 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 GPR142Q7Z601 462 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 SLC5A5Q92911 643 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 GJA10Q969M2 543 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 DISC1Q9NRI5 854 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 KCNH7Q9NS40 1196 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 SLC5A4Q9NY91 659 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 PKD2L1Q9P0L9 805 aa19.26■□□□□ 0.67
CCDC28B-202ENST00000421922 LOC102724159A0A0B4J2E5 919 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 SOWAHBA6NEL2 793 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 CA12O43570 354 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 EIF3JO75822 258 aaKnown RBP19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 ADORA2AP29274 412 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 CRHR2Q13324 411 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 PWP2Q15269 919 aaKnown RBP19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 DPP9Q86TI2 863 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 RIT2Q99578 217 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 TBC1D22BQ9NU19 505 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 SERTAD1Q9UHV2 236 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 ASB14A6NK59 587 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 MAFGO15525 162 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 SLC26A4O43511 780 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 CHMP2AO43633 222 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 AOC2O75106 756 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 CCT6AP40227 531 aaKnown RBP19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 CKAP2LQ8IYA6 745 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 INPP4AQ96PE3 977 aaPredicted RBP19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 AGO4Q9HCK5 861 aaKnown RBP19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 WBP1LQ9NX94 342 aa19.25■□□□□ 0.67
CCDC28B-202ENST00000421922 ZNF236Q9UL36 1845 aa19.24■□□□□ 0.67
CCDC28B-202ENST00000421922 LRRC37A2A6NM11 1700 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms