RNA–Protein interactions for RNA: ENST00000420377.6

PTPN22-202, Transcript of protein tyrosine phosphatase, non-receptor type 22, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN22, Length 2,726 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN22-202ENST00000420377 CCDC89Q8N998 374 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 GTF3C2Q8WUA4 911 aaPredicted RBP4.61□□□□□ -1.67
PTPN22-202ENST00000420377 ANKRD49Q8WVL7 239 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 ATXN2LQ8WWM7 1075 aaKnown RBP4.61□□□□□ -1.67
PTPN22-202ENST00000420377 LZICQ8WZA0 190 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 CLIP3Q96DZ5 547 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 NLRP3Q96P20 1036 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 GDF15Q99988 308 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 DDX25Q9UHL0 483 aaKnown RBP4.61□□□□□ -1.67
PTPN22-202ENST00000420377 TCEAL9Q9UHQ7 104 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 FKBPLQ9UIM3 349 aa4.61□□□□□ -1.67
PTPN22-202ENST00000420377 ZBBXA8MT70 800 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 C19orf81C9J6K1 198 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 DIAPH1O60610 1272 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 RPN1P04843 607 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 MCM3P25205 808 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 SP3Q02447 781 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 NR1H3Q13133 447 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 PLEKHG6Q3KR16 790 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 THOC7Q6I9Y2 204 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 CCSAPQ6IQ19 270 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 SLC30A9Q6PML9 568 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 WDR66Q8TBY9 1149 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 WHAMMQ8TF30 809 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 LTV1Q96GA3 475 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 C8orf76Q96K31 380 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 NEK1Q96PY6 1258 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 BCL2L13Q9BXK5 485 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 EPB41L4AQ9HCS5 686 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 KMT5AQ9NQR1 393 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 TBK1Q9UHD2 729 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 GTF3C4Q9UKN8 822 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 VPS9D1Q9Y2B5 631 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ARAP2Q8WZ64 1704 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 COL4A5P29400 1685 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 CASP8AP2Q9UKL3 1982 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 A0A0B4J203 849 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 GTPBP10A4D1E9 387 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 H0Y3Z8 333 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 M0R2C6 588 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ARHGAP33O14559 1287 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 PPIP5K2O43314 1243 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ERLIN2O94905 339 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 MBD4O95243 580 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 DESP17661 470 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 RASA1P20936 1047 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 IBSPP21815 317 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ATP2B4P23634 1241 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 KIF11P52732 1056 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 INHBCP55103 352 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 PPIDQ08752 370 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 VPS53Q5VIR6 699 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 IRGCQ6NXR0 463 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 FIP1L1Q6UN15 594 aaKnown RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 KRT26Q7Z3Y9 468 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 IQCA1Q86XH1 822 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ESX1Q8N693 406 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ZNF75CPQ92670 426 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 SMARCE1Q969G3 411 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 PPP1R14BQ96C90 147 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 TBC1D31Q96DN5 1066 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 EPSTI1Q96J88 318 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 JPH2Q9BR39 696 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 BUD13Q9BRD0 619 aaKnown RBP eCLIP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 CENPOQ9BU64 300 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 PCDH18Q9HCL0 1135 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 ARGLU1Q9NWB6 273 aaPredicted RBP4.6□□□□□ -1.67
PTPN22-202ENST00000420377 MTMR10Q9NXD2 777 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 IL20Q9NYY1 176 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 POLG2Q9UHN1 485 aa4.6□□□□□ -1.67
PTPN22-202ENST00000420377 LOC100996750A0A140TA64 210 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 GOLGA6L9A6NEM1 432 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L15C9J2P7 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L10C9JJH3 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L13C9JLJ4 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L12C9JPN9 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L11C9JVI0 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L21D6R901 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L18D6R9N7 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L22D6RA61 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L17D6RBQ6 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L19D6RCP7 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L20D6RJB6 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 RNASEH2AO75792 299 aaKnown RBP4.59□□□□□ -1.67
PTPN22-202ENST00000420377 CYP1A2P05177 515 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 ALOX15P16050 662 aaPredicted RBP4.59□□□□□ -1.67
PTPN22-202ENST00000420377 GTF2A2P52657 109 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP17L24Q0WX57 530 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 NUGGCQ68CJ6 796 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 CREB3L3Q68CJ9 461 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 ALKBH2Q6NS38 261 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 TMC6Q7Z403 805 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 USP48Q86UV5 1035 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 BPHLQ86WA6 291 aaPredicted RBP4.59□□□□□ -1.67
PTPN22-202ENST00000420377 CEP57Q86XR8 500 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 LILRB1Q8NHL6 650 aaPredicted RBP4.59□□□□□ -1.67
PTPN22-202ENST00000420377 HELQQ8TDG4 1101 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 APPBP2Q92624 585 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 PPP2R3CQ969Q6 453 aa4.59□□□□□ -1.67
PTPN22-202ENST00000420377 ASIC4Q96FT7 647 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms