RNA–Protein interactions for RNA: ENST00000419442.1

RAPGEF1-205, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 5

Gene RAPGEF1, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-205ENST00000419442 SMRP1Q8NCR6 262 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 OSBP2Q969R2 916 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 EMID1Q96A84 441 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 C11orf84Q9BUA3 381 aaPredicted RBP12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 KATNAL1Q9BW62 490 aa12.42□□□□□ -0.42
RAPGEF1-205ENST00000419442 DCHS1Q96JQ0 3298 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 RSPH10B2B2RC85 870 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 B4DLN1 442 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 H0Y858 1186 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 GALR2O43603 387 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 MMP1P03956 469 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 RSPH10BP0C881 870 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 RLBP1P12271 317 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 HOXD8P13378 290 aaPredicted RBP12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 CTNNB1P35222 781 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 BMPR1AP36894 532 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 ID4P47928 161 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 MRPL12P52815 198 aaKnown RBP12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 CACNA1BQ00975 2339 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 COASYQ13057 564 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 MFSD10Q14728 455 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 DGKDQ16760 1214 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 SERINC5Q86VE9 423 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 ITPRIPQ8IWB1 547 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 APPBP2Q92624 585 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 RC3H2Q9HBD1 1191 aaKnown RBP12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 TLR9Q9NR96 1032 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 CLEC1BQ9P126 229 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 PNMA2Q9UL42 364 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 TRPC6Q9Y210 931 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 RWDD3Q9Y3V2 267 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 GVINP1Q7Z2Y8 2422 aa12.41□□□□□ -0.42
RAPGEF1-205ENST00000419442 WDR19Q8NEZ3 1342 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 GNAT2P19087 354 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 ICAM3P32942 547 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 TDO2P48775 406 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 RRP1P56182 461 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 ZNF200P98182 395 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 CAMK1Q14012 370 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 LY6KQ17RY6 165 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 KIAA0753Q2KHM9 967 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 SYDE2Q5VT97 1194 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 TTBK2Q6IQ55 1244 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 FIBCD1Q8N539 461 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 DCAF4Q8WV16 495 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 SEPT8Q92599 483 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 CLP1Q92989 425 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 CHMP4CQ96CF2 233 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 IL17RAQ96F46 866 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 ALG1Q9BT22 464 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 PHF7Q9BWX1 381 aaPredicted RBP12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 IFIH1Q9BYX4 1025 aaKnown RBP12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 IL17RBQ9NRM6 502 aa12.4□□□□□ -0.42
RAPGEF1-205ENST00000419442 TTC3P53804 2025 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 ZNF316A6NFI3 1004 aaPredicted RBP12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 GPAA1O43292 621 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 HOXC8P31273 242 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 NDUFV1P49821 464 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 IFNL3Q8IZI9 196 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 EFHBQ8N7U6 833 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 RGS22Q8NE09 1264 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 OSBPL7Q9BZF2 842 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 MAF1Q9H063 256 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 STX8Q9UNK0 236 aa12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.39□□□□□ -0.43
RAPGEF1-205ENST00000419442 RAB11FIP3O75154 756 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 CAND2O75155 1236 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 UPP2O95045 317 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 ATF7P17544 494 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 SLC16A2P36021 539 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 THPOP40225 353 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 PTPN21Q16825 1174 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 FTSJ3Q8IY81 847 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 KBTBD3Q8NAB2 608 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 PPTC7Q8NI37 304 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 PLVAPQ9BX97 442 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 IGFLR1Q9H665 355 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 INCENPQ9NQS7 918 aa12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 DDX41Q9UJV9 622 aaKnown RBP12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 USP15Q9Y4E8 981 aaPredicted RBP12.38□□□□□ -0.43
RAPGEF1-205ENST00000419442 ADGRA3Q8IWK6 1321 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 PATL2C9JE40 543 aaKnown RBP12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 GLP2RO95838 553 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 ZNF286BP0CG31 522 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 LAMC2Q13753 1193 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 CCDC96Q2M329 555 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 CHST3Q7LGC8 479 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 SUSD6Q92537 303 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 APBB2Q92870 758 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 P2RX5Q93086 422 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 RIPOR3Q96MK2 946 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
RAPGEF1-205ENST00000419442 PLXNA4Q9HCM2 1894 aa12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 RNF113AO15541 343 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 NMT2O60551 498 aa12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 PDGFBP01127 241 aaPredicted RBP12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 SLC3A2P08195 630 aaKnown RBP12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 PPARAQ07869 468 aa12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 SEPT14Q6ZU15 432 aa12.36□□□□□ -0.43
RAPGEF1-205ENST00000419442 ADGRD2Q7Z7M1 963 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms