RNA–Protein interactions for RNA: ENST00000418713.5

RPUSD3-202, Transcript of RNA pseudouridylate synthase domain containing 3, humanhuman

TSL 2

Gene RPUSD3, Length 955 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD3-202ENST00000418713 DGKDQ16760 1214 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 CELF3Q5SZQ8 465 aaKnown RBP22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 BLIDQ8IZY5 108 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 DAGLBQ8NCG7 672 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 ALG1Q9BT22 464 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 JADE2Q9NQC1 790 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 PRKAG2Q9UGJ0 569 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 LRRC37A2A6NM11 1700 aa22.62■■□□□ 1.21
RPUSD3-202ENST00000418713 A0A0U1RQG5 324 aaPredicted RBP22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 PPFIA4O75335 1185 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 RGS20O76081 388 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 ARIH2O95376 493 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 CYP3A4P08684 503 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 USP11P51784 963 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 ARHGAP4P98171 946 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 MTMR1Q13613 665 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 CEP55Q53EZ4 464 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 NIPA1Q7RTP0 329 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 NSUN7Q8NE18 718 aaKnown RBP22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 PPTC7Q8NI37 304 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 MXRA8Q9BRK3 442 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 MTG1Q9BT17 334 aaPredicted RBP22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 UBIAD1Q9Y5Z9 338 aa22.61■■□□□ 1.21
RPUSD3-202ENST00000418713 MYADML2A6NDP7 307 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 NOP56O00567 594 aaKnown RBP22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 CTAGE5O15320 804 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 LARGE1O95461 756 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 CTDNEP1O95476 244 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 GGPS1O95749 300 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 MYL3P08590 195 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 ATN1P54259 1190 aaPredicted RBP22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 SNX17Q15036 470 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 MYSM1Q5VVJ2 828 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 CCDC83Q8IWF9 413 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 FAM184AQ8NB25 1140 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 COPS5Q92905 334 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 TOX2Q96NM4 488 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 TMEM260Q9NX78 707 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 PDE4DIPQ5VU43 2346 aa22.6■■□□□ 1.21
RPUSD3-202ENST00000418713 DCDC2CA8MYV0 355 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 ARHGAP1Q07960 439 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 METTL7BQ6UX53 244 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 KRT25Q7Z3Z0 450 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 AFG1LQ8WV93 481 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 SPATA33Q96N06 139 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 PHF20Q9BVI0 1012 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 KATNAL1Q9BW62 490 aa22.59■■□□□ 1.21
RPUSD3-202ENST00000418713 ARVCFO00192 962 aa22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 TLR3O15455 904 aaKnown RBP22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 UBA1P22314 1058 aaKnown RBP22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 RTP1P59025 263 aa22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 SETQ01105 290 aaPredicted RBP22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 SAFBQ15424 915 aaKnown RBP eCLIP22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 LRRC26Q2I0M4 334 aa22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 CXCL17Q6UXB2 119 aa22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 NAP1L4Q99733 375 aaKnown RBP22.58■■□□□ 1.21
RPUSD3-202ENST00000418713 CCDC194A0A1B0GVG4 234 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 MMP3P08254 477 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 ITGB5P18084 799 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 PURAQ00577 322 aaKnown RBP22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 TMEM63BQ5T3F8 832 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 SDF4Q9BRK5 362 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 ATP11BQ9Y2G3 1177 aa22.57■■□□□ 1.2
RPUSD3-202ENST00000418713 BRCA2P51587 3418 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 MEIS1O00470 390 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 FDPSP14324 419 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 PTPN11Q06124 597 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 ITGA7Q13683 1181 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 NONOQ15233 471 aaKnown RBP eCLIP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 PRPF38BQ5VTL8 546 aaKnown RBP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 ANKRD33Q7Z3H0 272 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 C7orf61Q8IZ16 206 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 ZFP91Q96JP5 570 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 PGBD1Q96JS3 809 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 KCNH7Q9NS40 1196 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 TCEAL9Q9UHQ7 104 aa22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 TNRC18O15417 2968 aaPredicted RBP22.56■■□□□ 1.2
RPUSD3-202ENST00000418713 CIITAP33076 1130 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 KRT2P35908 639 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 SP2Q02086 613 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 CYFIP1Q7L576 1253 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 PLA2G4DQ86XP0 818 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 AIFM3Q96NN9 605 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 KCNJ14Q9UNX9 436 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 ZSCAN21Q9Y5A6 473 aaPredicted RBP22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 NFASCO94856 1347 aa22.55■■□□□ 1.2
RPUSD3-202ENST00000418713 SUPT20HL2P0C7V6 817 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 CDK7P50613 346 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 TRIM60Q495X7 471 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 NFRKBQ6P4R8 1299 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 CRYGNQ8WXF5 182 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 TNPO1Q92973 898 aaKnown RBP22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 TBC1D22BQ9NU19 505 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 MYH7BA7E2Y1 1941 aa22.54■■□□□ 1.2
RPUSD3-202ENST00000418713 JAK2O60674 1132 aa22.53■■□□□ 1.2
RPUSD3-202ENST00000418713 HOXD8P13378 290 aaPredicted RBP22.53■■□□□ 1.2
RPUSD3-202ENST00000418713 IRX5P78411 483 aaPredicted RBP22.53■■□□□ 1.2
RPUSD3-202ENST00000418713 TLE2Q04725 743 aa22.53■■□□□ 1.2
RPUSD3-202ENST00000418713 MOXD1Q6UVY6 613 aa22.53■■□□□ 1.2
RPUSD3-202ENST00000418713 SLC43A3Q8NBI5 491 aa22.53■■□□□ 1.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms