RNA–Protein interactions for RNA: ENST00000418628.5

PTCD3-204, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 532 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-204ENST00000418628 A0A1W2PQY0 241 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 A6NJR5 290 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 DYNC1LI2O43237 492 aaPredicted RBP21.32■■□□□ 1
PTCD3-204ENST00000418628 FIBPO43427 364 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 EDIL3O43854 480 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 HOXD8P13378 290 aaPredicted RBP21.32■■□□□ 1
PTCD3-204ENST00000418628 ACLYP53396 1101 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 SP2Q02086 613 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 KCNA10Q16322 511 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 LY6KQ17RY6 165 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 GNPTABQ3T906 1256 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 C1orf53Q5VUE5 145 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 PCSK9Q8NBP7 692 aaKnown RBP21.32■■□□□ 1
PTCD3-204ENST00000418628 ALG1Q9BT22 464 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 GJB4Q9NTQ9 266 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 TANC1Q9C0D5 1861 aa21.32■■□□□ 1
PTCD3-204ENST00000418628 GH1P01241 217 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 NLRP5P59047 1200 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 ARHGAP4P98171 946 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 BEX3Q00994 111 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 BLIDQ8IZY5 108 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 OR6J1Q8NGC5 347 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 AP5M1Q9H0R1 490 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 KCNJ14Q9UNX9 436 aa21.31■■□□□ 1
PTCD3-204ENST00000418628 IGLV3-22A0A075B6J6 115 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 ASGR1P07306 291 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 HMGN5P82970 282 aaKnown RBP21.3■■□□□ 1
PTCD3-204ENST00000418628 GNASQ5JWF2 1037 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 MYSM1Q5VVJ2 828 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 TNFRSF25Q93038 417 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 SENP7Q9BQF6 1050 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 HTATIP2Q9BUP3 242 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 JADE2Q9NQC1 790 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 RTEL1Q9NZ71 1219 aa21.3■■□□□ 1
PTCD3-204ENST00000418628 KCNA2P16389 499 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 XBP1P17861 261 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 CIITAP33076 1130 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 CPT1AP50416 773 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 LRRC26Q2I0M4 334 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 CELF3Q5SZQ8 465 aaKnown RBP21.29■■□□□ 1
PTCD3-204ENST00000418628 NIPA1Q7RTP0 329 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 NLRX1Q86UT6 975 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 MXRA8Q9BRK3 442 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 SENP6Q9GZR1 1112 aaPredicted RBP21.29■■□□□ 1
PTCD3-204ENST00000418628 ELP1O95163 1332 aa21.29■■□□□ 1
PTCD3-204ENST00000418628 FAM86B1E9PN63 330 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 MEIS1O00470 390 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 MMP3P08254 477 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 FAM86B2P0C5J1 330 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 PURAQ00577 322 aaKnown RBP21.28■■□□□ 1
PTCD3-204ENST00000418628 CEP55Q53EZ4 464 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 SLC39A5Q6ZMH5 540 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 PPTC7Q8NI37 304 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 CYP2W1Q8TAV3 490 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 CDHR1Q96JP9 859 aa21.28■■□□□ 1
PTCD3-204ENST00000418628 MAFGO15525 162 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 GGPS1O95749 300 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 MMP1P03956 469 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 MTMR1Q13613 665 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 LAMC2Q13753 1193 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 OXER1Q8TDS5 423 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 AFG1LQ8WV93 481 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 FERMT2Q96AC1 680 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 LENG9Q96B70 501 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 BCAS3Q9H6U6 928 aa21.27■■□□□ 1
PTCD3-204ENST00000418628 ATP9AO75110 1047 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 CABYRO75952 493 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 MYCNP04198 464 aaPredicted RBP21.26■□□□□ 0.99
PTCD3-204ENST00000418628 CUL4AQ13619 759 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 NEDD9Q14511 834 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 HSDL1Q3SXM5 330 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 KRT40Q6A162 431 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 METTL7BQ6UX53 244 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 SLC43A3Q8NBI5 491 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 KCNH7Q9NS40 1196 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 POLR3EQ9NVU0 708 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 GRIN2DO15399 1336 aa21.26■□□□□ 0.99
PTCD3-204ENST00000418628 ZEB2O60315 1214 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 USP11P51784 963 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 CXCL17Q6UXB2 119 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 KRT25Q7Z3Z0 450 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 DHX37Q8IY37 1157 aaKnown RBP21.25■□□□□ 0.99
PTCD3-204ENST00000418628 TBCKQ8TEA7 893 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 GLT1D1Q96MS3 346 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 MBOAT7Q96N66 472 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 STARD7Q9NQZ5 370 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 NFASCO94856 1347 aa21.25■□□□□ 0.99
PTCD3-204ENST00000418628 KPNA6O60684 536 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 ARP10275 920 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 CDK7P50613 346 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 RTP1P59025 263 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 SETQ01105 290 aaPredicted RBP21.24■□□□□ 0.99
PTCD3-204ENST00000418628 MOXD1Q6UVY6 613 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 SIP14410 1827 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 ARID2Q68CP9 1835 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 EVPLQ92817 2033 aa21.24■□□□□ 0.99
PTCD3-204ENST00000418628 LOXHD1Q8IVV2 1947 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 SCN5AQ14524 2016 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 CYP3A7-CYP3A51PA0A087WV96 503 aa21.23■□□□□ 0.99
PTCD3-204ENST00000418628 A0A0U1RQG5 324 aaPredicted RBP21.23■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms