RNA–Protein interactions for RNA: ENST00000417540.5

HDLBP-206, Transcript of high density lipoprotein binding protein, humanhuman

TSL 4

Gene HDLBP, Length 525 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-206ENST00000417540 ALDH8A1Q9H2A2 487 aaPredicted RBP11.77□□□□□ -0.53
HDLBP-206ENST00000417540 ZSWIM6Q9HCJ5 1215 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 TMEM39AQ9NV64 488 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 LOXHD1Q8IVV2 1947 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 ELP1O95163 1332 aa11.77□□□□□ -0.53
HDLBP-206ENST00000417540 A6NJR5 290 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 PIK3CDO00329 1044 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 ACRP10323 421 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 ITGB5P18084 799 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 SHHQ15465 462 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 NBPF20Q3BBV1 942 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 VSIG10LQ86VR7 867 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 DHX38Q92620 1227 aaKnown RBP11.76□□□□□ -0.53
HDLBP-206ENST00000417540 SCLYQ96I15 445 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 IWS1Q96ST2 819 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 LZTS2Q9BRK4 669 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 MTG1Q9BT17 334 aaPredicted RBP11.76□□□□□ -0.53
HDLBP-206ENST00000417540 SLC26A6Q9BXS9 759 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 VPS54Q9P1Q0 977 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 PRKAG2Q9UGJ0 569 aa11.76□□□□□ -0.53
HDLBP-206ENST00000417540 ARID2Q68CP9 1835 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 NKRFO15226 690 aaKnown RBP eCLIP11.75□□□□□ -0.535e-7■■□□□ 12.2
HDLBP-206ENST00000417540 F2P00734 622 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 HMGB1P09429 215 aaKnown RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 CSF2RAP15509 400 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 RAG1P15918 1043 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 PDIA3P30101 505 aaKnown RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 BMP8BP34820 402 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 CLK2P49760 499 aaKnown RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 ADCY7P51828 1080 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 CCL23P55773 120 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 ZNF200P98182 395 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 PFKFB3Q16875 520 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 GDF6Q6KF10 455 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 PPP1R18Q6NYC8 613 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 SYNE3Q6ZMZ3 975 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 TMTC2Q8N394 836 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 CYP2W1Q8TAV3 490 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 MPHOSPH6Q99547 160 aaKnown RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 NOC4LQ9BVI4 516 aaKnown RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 BARHL2Q9NY43 387 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 TPCN1Q9ULQ1 816 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 PCDHA6Q9UN73 950 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 Q9Y3F1 56 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 PCDHA8Q9Y5H6 950 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 V9GY48 417 aaPredicted RBP11.75□□□□□ -0.53
HDLBP-206ENST00000417540 ATG2AQ2TAZ0 1938 aa11.75□□□□□ -0.53
HDLBP-206ENST00000417540 ATP9AO75110 1047 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 EIF3JO75822 258 aaKnown RBP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 HOXD8P13378 290 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 SCG2P13521 617 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 KCNA2P16389 499 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 SMARCA1P28370 1054 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 FOSBP53539 338 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 RCAN1P53805 252 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 AK2P54819 239 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 SCRN1Q12765 414 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 TCTN1Q2MV58 587 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 CELF3Q5SZQ8 465 aaKnown RBP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 MYSM1Q5VVJ2 828 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 JAKMIP3Q5VZ66 844 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 PCNX4Q63HM2 1172 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 CYFIP1Q7L576 1253 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 PPTC7Q8NI37 304 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 CUL5Q93034 780 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 EMID1Q96A84 441 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 ZBTB10Q96DT7 871 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 SPATA33Q96N06 139 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 LBHD1Q9BQE6 289 aaPredicted RBP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.74□□□□□ -0.53
HDLBP-206ENST00000417540 ALG1Q9BT22 464 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 HIPK3Q9H422 1215 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 PSTPIP2Q9H939 334 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 GJB4Q9NTQ9 266 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 POLR3EQ9NVU0 708 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 CYP46A1Q9Y6A2 500 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 MROH7Q68CQ1 1323 aa11.74□□□□□ -0.53
HDLBP-206ENST00000417540 DCDC2CA8MYV0 355 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 TRANK1O15050 2925 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 LGALS2P05162 132 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 PSMA5P28066 241 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 PSEN2P49810 448 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 FPGSQ05932 587 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 MFSD10Q14728 455 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 C16orf59Q7L2K0 433 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 DHX37Q8IY37 1157 aaKnown RBP11.73□□□□□ -0.53
HDLBP-206ENST00000417540 FBXL16Q8N461 479 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 TOX2Q96NM4 488 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 KIAA1671Q9BY89 1806 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 RIC8AQ9NPQ8 531 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 PDRG1Q9NUG6 133 aa11.73□□□□□ -0.53
HDLBP-206ENST00000417540 A0A1W2PPC1 479 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 SMCO2A6NFE2 343 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 FIBPO43427 364 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 EDIL3O43854 480 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 ZEB2O60315 1214 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 CABYRO75952 493 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 CTDNEP1O95476 244 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 TIMP1P01033 207 aa11.72□□□□□ -0.53
HDLBP-206ENST00000417540 ICAM3P32942 547 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms