RNA–Protein interactions for RNA: ENST00000417521.5

DDR1-231, Transcript of discoidin domain receptor tyrosine kinase 1, human

TSL 5

Gene DDR1, Length 1,479 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDR1-231	ENST00000417521	ZFP91	Q96JP5	570 aa	Predicted RBP	18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	UPF3B	Q9BZI7	483 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	TM6SF1	Q9BZW5	370 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	ZSWIM6	Q9HCJ5	1215 aa		18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	BAZ2B	Q9UIF8	2168 aa	Known RBP	18.81	■□□□□ 0.6
DDR1-231	ENST00000417521	SPATA31C2	B4DYI2	1134 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	FIBP	O43427	364 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	HOXD8	P13378	290 aa	Predicted RBP	18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	UBA1	P22314	1058 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	CYP2C18	P33260	490 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	EVC	P57679	992 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	FAM47C	Q5HY64	1035 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	RUFY3	Q7L099	469 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	KAT2B	Q92831	832 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	SPATA33	Q96N06	139 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	NOC4L	Q9BVI4	516 aa	Known RBP	18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	MLXIP	Q9HAP2	919 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	RTEL1	Q9NZ71	1219 aa		18.8	■□□□□ 0.6
DDR1-231	ENST00000417521	SPDYE3	A6NKU9	549 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	CSF2RA	P15509	400 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	RBM25	P49756	843 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	NAPA	P54920	295 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	NEDD9	Q14511	834 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	HSDL1	Q3SXM5	330 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	NLRX1	Q86UT6	975 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	SESTD1	Q86VW0	696 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	RIC8A	Q9NPQ8	531 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	TRMT13	Q9NUP7	481 aa	Known RBP	18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	BARHL2	Q9NY43	387 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	NID2	Q14112	1375 aa		18.79	■□□□□ 0.6
DDR1-231	ENST00000417521	UBE2S	Q16763	222 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	TYW1B	Q6NUM6	668 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	IL17RA	Q96F46	866 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	SENP7	Q9BQF6	1050 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	KATNAL1	Q9BW62	490 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	GLT8D2	Q9H1C3	349 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	PCDHA6	Q9UN73	950 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	PCDHA8	Q9Y5H6	950 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	CYP46A1	Q9Y6A2	500 aa		18.78	■□□□□ 0.6
DDR1-231	ENST00000417521	STXBP3	O00186	592 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	F2	P00734	622 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	SEMA3F	Q13275	785 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	C16orf59	Q7L2K0	433 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	RNPC3	Q96LT9	517 aa	Known RBP	18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	TBC1D32	Q96NH3	1257 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	KIF2C	Q99661	725 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	EHMT1	Q9H9B1	1298 aa		18.77	■□□□□ 0.6
DDR1-231	ENST00000417521	SMCO2	A6NFE2	343 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	HAS3	O00219	553 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	FOS	P01100	380 aa	Predicted RBP	18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	CYP2C9	P11712	490 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	PDIA3	P30101	505 aa	Known RBP	18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	CHMP4BP1	P59074	171 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	PFKFB3	Q16875	520 aa	Predicted RBP	18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	PSRC1	Q6PGN9	363 aa	Predicted RBP	18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	METTL7B	Q6UX53	244 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	GPRASP2	Q96D09	838 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	CDHR1	Q96JP9	859 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	18.77	■□□□□ 0.59	4e-6	■■■■□ 22.3
DDR1-231	ENST00000417521	IL23A	Q9NPF7	189 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	UMODL1	Q5DID0	1318 aa		18.77	■□□□□ 0.59
DDR1-231	ENST00000417521	CUL9	Q8IWT3	2517 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	MAFG	O15525	162 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	PRPF3	O43395	683 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	PSEN2	P49810	448 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	ADCY7	P51828	1080 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	CCL23	P55773	120 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	SMAD3	P84022	425 aa	Known RBP	18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	TMEM240	Q5SV17	173 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	GIMAP8	Q8ND71	665 aa	Predicted RBP	18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	WNT8A	Q9H1J5	351 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	BCAS3	Q9H6U6	928 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	NOD1	Q9Y239	953 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	UBIAD1	Q9Y5Z9	338 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	LTBP2	Q14767	1821 aa		18.76	■□□□□ 0.59
DDR1-231	ENST00000417521	SORBS3	O60504	671 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	SCG2	P13521	617 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	ITGB5	P18084	799 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	TOB2	Q14106	344 aa	Predicted RBP	18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	MFSD10	Q14728	455 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	NTRK3	Q16288	839 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	KIAA0753	Q2KHM9	967 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	FAM109B	Q6ICB4	259 aa	Predicted RBP	18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	CYFIP1	Q7L576	1253 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	RPUSD2	Q8IZ73	545 aa	Known RBP	18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	C7orf31	Q8N865	590 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	PPP1R13L	Q8WUF5	828 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	PDRG1	Q9NUG6	133 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	GTF2IRD1	Q9UHL9	959 aa		18.75	■□□□□ 0.59
DDR1-231	ENST00000417521	MYH6	P13533	1939 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	PITPNM1	O00562	1244 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	NOP56	O00567	594 aa	Known RBP	18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	ZNF286B	P0CG31	522 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	IFNAR1	P17181	557 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	AKAP17A	Q02040	695 aa	Known RBP	18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	AP3B2	Q13367	1082 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	PTGIS	Q16647	500 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	ZNF365	Q70YC5	407 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	DEFB123	Q8N688	67 aa		18.74	■□□□□ 0.59
DDR1-231	ENST00000417521	CCDC12	Q8WUD4	166 aa	Predicted RBP	18.74	■□□□□ 0.59

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