RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 USP17L13C9JLJ4 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L11C9JVI0 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L18D6R9N7 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L22D6RA61 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L17D6RBQ6 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L19D6RCP7 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L20D6RJB6 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 PLCG2P16885 1265 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 SMARCA1P28370 1054 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 NOVP48745 357 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L24Q0WX57 530 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 COASYQ13057 564 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 PDIA5Q14554 519 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 USP17L6PQ6QN14 398 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 ACBD3Q9H3P7 528 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 VIPAS39Q9H9C1 493 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 SBF2Q86WG5 1849 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 MYH10P35580 1976 aa16.04■□□□□ 0.16
HDAC9-208ENST00000417496 A0A0U1RQG5 324 aaPredicted RBP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 MPHOSPH10O00566 681 aaKnown RBP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 TLR2O60603 784 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 AARSP49588 968 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 SCNN1DP51172 638 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 LRRC63Q05C16 580 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 EHHADHQ08426 723 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 SHROOM1Q2M3G4 852 aaPredicted RBP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 HGSNATQ68CP4 663 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 LRRC31Q6UY01 552 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 MYOCDQ8IZQ8 938 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 RAB34Q9BZG1 259 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 PANK4Q9NVE7 773 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 TMEM51Q9NW97 253 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 PCDHA12Q9UN75 941 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 KIAA1024Q9UPX6 916 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 ATP2B4P23634 1241 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 KCTD19Q17RG1 926 aaPredicted RBP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 CCDC40Q4G0X9 1142 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 TMEM119Q4V9L6 283 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 C15orf52Q6ZUT6 534 aaKnown RBP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 SND1Q7KZF4 910 aaKnown RBP eCLIP16.03■□□□□ 0.16
HDAC9-208ENST00000417496 C10orf67Q8IYJ2 551 aa16.03■□□□□ 0.16
HDAC9-208ENST00000417496 NOL4O94818 638 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 MCM3P25205 808 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 RNASE9P60153 205 aaKnown RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 POLR2FP61218 127 aaKnown RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 GABPAQ06546 454 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 ASTE1Q2TB18 679 aaPredicted RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 ASPRV1Q53RT3 343 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 PDXDC1Q6P996 788 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 FNBP4Q8N3X1 1017 aaPredicted RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 FAM163AQ96GL9 167 aaPredicted RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 TLR10Q9BXR5 811 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 ZHX3Q9H4I2 956 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 POLD4Q9HCU8 107 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 FEZ2Q9UHY8 353 aaPredicted RBP16.02■□□□□ 0.16
HDAC9-208ENST00000417496 GAKO14976 1311 aa16.02■□□□□ 0.16
HDAC9-208ENST00000417496 COL24A1Q17RW2 1714 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 PNMA6FA0A0J9YX94 578 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 LCA5LO95447 670 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 STAT3P40763 770 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 ZNF543Q08ER8 600 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.15
HDAC9-208ENST00000417496 VPS72Q15906 364 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 DNAAF5Q86Y56 855 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 AFAP1L1Q8TED9 768 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 RIC8AQ9NPQ8 531 aa16.02■□□□□ 0.15
HDAC9-208ENST00000417496 PACSIN2Q9UNF0 486 aaPredicted RBP16.02■□□□□ 0.15
HDAC9-208ENST00000417496 POTEB3A0JP26 581 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 FAM196BA6NMK8 535 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 POTECB2RU33 542 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 MYO1CO00159 1063 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 TTLL1O95922 423 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 SERPINB2P05120 415 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 SNHG28P0DPA3 235 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 FKBP3Q00688 224 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 ZCWPW2Q504Y3 356 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 FAM26FQ5R3K3 315 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 FAM83BQ5T0W9 1011 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 CCDC181Q5TID7 509 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 KLHDC7AQ5VTJ3 777 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 POTEBQ6S5H4 581 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 CERS5Q8N5B7 392 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 TSG101Q99816 390 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 RABEP2Q9H5N1 569 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 PSTPIP2Q9H939 334 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 RBM12Q9NTZ6 932 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 RSPH14Q9UHP6 348 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 COL4A3BPQ9Y5P4 624 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 FGFR1OPO95684 399 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 CRY2Q49AN0 593 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 AENQ8WTP8 325 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 ALS2CR12Q96Q35 445 aa16.01■□□□□ 0.15
HDAC9-208ENST00000417496 LSM14BQ9BX40 385 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 CWC15Q9P013 229 aaKnown RBP16.01■□□□□ 0.15
HDAC9-208ENST00000417496 GOLGA6BA6NDN3 693 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 FTCDO95954 541 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 CLK2P49760 499 aaKnown RBP16■□□□□ 0.15
HDAC9-208ENST00000417496 SNAP25P60880 206 aa16■□□□□ 0.15
HDAC9-208ENST00000417496 ORC2Q13416 577 aaPredicted RBP16■□□□□ 0.15
HDAC9-208ENST00000417496 HERC4Q5GLZ8 1057 aaPredicted RBP16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms