RNA–Protein interactions for RNA: ENST00000417122.6

ITGB1-204, Transcript of integrin subunit beta 1, humanhuman

TSL 4

Gene ITGB1, Length 569 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-204ENST00000417122 CYP2C9P11712 490 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 ICAM3P32942 547 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 UBE2SQ16763 222 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 XRRA1Q6P2D8 792 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 SPATA33Q96N06 139 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 BUD13Q9BRD0 619 aaKnown RBP eCLIP17.96■□□□□ 0.47
ITGB1-204ENST00000417122 AGXT2Q9BYV1 514 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 MLXIPQ9HAP2 919 aa17.96■□□□□ 0.47
ITGB1-204ENST00000417122 CCDC196A0A1B0GTZ2 297 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 SPATA31C2B4DYI2 1134 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 hCG_1984214I3L0E3 225 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 FIBPO43427 364 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 ADD1P35611 737 aaKnown RBP17.95■□□□□ 0.46
ITGB1-204ENST00000417122 NAPAP54920 295 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 CCL23P55773 120 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 HSDL1Q3SXM5 330 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 TMEM240Q5SV17 173 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 Q7L0L9 218 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 C16orf59Q7L2K0 433 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 DEFB123Q8N688 67 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 ZNF713Q8N859 430 aaPredicted RBP17.95■□□□□ 0.46
ITGB1-204ENST00000417122 KATNAL1Q9BW62 490 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 IL23AQ9NPF7 189 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 DOCK5Q9H7D0 1870 aa17.95■□□□□ 0.46
ITGB1-204ENST00000417122 SPDYE3A6NKU9 549 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PPFIA4O75335 1185 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 ZNF286BP0CG31 522 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 ACRP10323 421 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 HOXD8P13378 290 aaPredicted RBP17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PSEN2P49810 448 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 SEMA3FQ13275 785 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 NEDD9Q14511 834 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 TYW1BQ6NUM6 668 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PPP1R18Q6NYC8 613 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PSRC1Q6PGN9 363 aaPredicted RBP17.94■□□□□ 0.46
ITGB1-204ENST00000417122 RUFY3Q7L099 469 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 SESTD1Q86VW0 696 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 WNT8AQ9H1J5 351 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PCDHA6Q9UN73 950 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 PCDHA8Q9Y5H6 950 aa17.94■□□□□ 0.46
ITGB1-204ENST00000417122 NID2Q14112 1375 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 STXBP3O00186 592 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 F2P00734 622 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 SMAD3P84022 425 aaKnown RBP17.93■□□□□ 0.46
ITGB1-204ENST00000417122 MFSD10Q14728 455 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 PTGISQ16647 500 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 ZNF365Q70YC5 407 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 NLRX1Q86UT6 975 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 SCLYQ96I15 445 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 ALG1Q9BT22 464 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 BCAS3Q9H6U6 928 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 ZSWIM6Q9HCJ5 1215 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 RIC8AQ9NPQ8 531 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 BARHL2Q9NY43 387 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 NOD1Q9Y239 953 aa17.93■□□□□ 0.46
ITGB1-204ENST00000417122 HAS3O00219 553 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 KIAA0753Q2KHM9 967 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 FAM109BQ6ICB4 259 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-204ENST00000417122 GDF6Q6KF10 455 aaPredicted RBP17.92■□□□□ 0.46
ITGB1-204ENST00000417122 METTL7BQ6UX53 244 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 CYFIP1Q7L576 1253 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 TEX2Q8IWB9 1127 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 C7orf31Q8N865 590 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 GPRASP2Q96D09 838 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 SENP7Q9BQF6 1050 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 EHMT1Q9H9B1 1298 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 GTF2IRD1Q9UHL9 959 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 CYP46A1Q9Y6A2 500 aa17.92■□□□□ 0.46
ITGB1-204ENST00000417122 SMCO2A6NFE2 343 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 NOP56O00567 594 aaKnown RBP17.91■□□□□ 0.46
ITGB1-204ENST00000417122 FGBP02675 491 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 ADCY7P51828 1080 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 BFSP2Q13515 415 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 PFKFB3Q16875 520 aaPredicted RBP17.91■□□□□ 0.46
ITGB1-204ENST00000417122 RPUSD2Q8IZ73 545 aaKnown RBP17.91■□□□□ 0.46
ITGB1-204ENST00000417122 C16orf70Q9BSU1 422 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 TM6SF1Q9BZW5 370 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 MTMR10Q9NXD2 777 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 HDAC6Q9UBN7 1215 aa17.91■□□□□ 0.46
ITGB1-204ENST00000417122 SCN5AQ14524 2016 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 PITPNM1O00562 1244 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 PRPF3O43395 683 aaKnown RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 FOSP01100 380 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 SCG2P13521 617 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 ITGB5P18084 799 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 PDIA3P30101 505 aaKnown RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 EVCP57679 992 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 TOB2Q14106 344 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 ZNF697Q5TEC3 545 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 RASIP1Q5U651 963 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 RETREG2Q8NC44 543 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 GIMAP8Q8ND71 665 aaPredicted RBP17.9■□□□□ 0.46
ITGB1-204ENST00000417122 HERVK_113Q902F9 699 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 CDHR1Q96JP9 859 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 GLT8D2Q9H1C3 349 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 UBIAD1Q9Y5Z9 338 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 TANC1Q9C0D5 1861 aa17.9■□□□□ 0.46
ITGB1-204ENST00000417122 TRIP12Q14669 1992 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms