RNA–Protein interactions for RNA: ENST00000417040.1

UBR4-205, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 5

Gene UBR4, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-205ENST00000417040 TTC4O95801 387 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 PRR29P0C7W0 189 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ODR4Q5SWX8 454 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 RINT1Q6NUQ1 792 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 TRMT10CQ7L0Y3 403 aaKnown RBP13.06□□□□□ -0.32
UBR4-205ENST00000417040 GLG1Q92896 1179 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 PANX2Q96RD6 677 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 A0A0G2JND7 137 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 PLA2G4DQ86XP0 818 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 SDCCAG3Q96C92 435 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ORAI2Q96SN7 254 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 SMYD3Q9H7B4 428 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 STAP2Q9UGK3 403 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 RCOR1Q9UKL0 485 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 MFAP3LO75121 409 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 SLC4A1P02730 911 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ACTN1P12814 892 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 MFAP3P55082 362 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 FAM47EQ6ZV65 393 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 FMO2Q99518 471 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ZNF408Q9H9D4 720 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 SUGCTQ9HAC7 445 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 DNAJC5BQ9UF47 199 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ESYT3A0FGR9 886 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 MYO1FO00160 1098 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 GFPT1Q06210 699 aaPredicted RBP13.06□□□□□ -0.32
UBR4-205ENST00000417040 ZMYM1Q5SVZ6 1142 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 ANKRD35Q8N283 1001 aa13.06□□□□□ -0.32
UBR4-205ENST00000417040 PTPRTO14522 1441 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 ARHGEF10O15013 1369 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 EXOC1LA0A1B0GW35 172 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 GPC4O75487 556 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 ESRRAP11474 423 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 MAN2A1Q16706 1144 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 MAST1Q9Y2H9 1570 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 CYP2D7A0A087X1C5 515 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 DKC1O60832 514 aaKnown RBP eCLIP13.05□□□□□ -0.32
UBR4-205ENST00000417040 MT-ND3P03897 115 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 IGBP1P78318 339 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 DMP1Q13316 513 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 RETREG2Q8NC44 543 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 DHTKD1Q96HY7 919 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 COL4A3BPQ9Y5P4 624 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 PEG3Q9GZU2 1588 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 MAGI2Q86UL8 1455 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 LRRIQ4A6NIV6 560 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TCP10L2B9ZVM9 353 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TNNC2P02585 160 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 BTDP43251 543 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 SNAP25P60880 206 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 RUNDC3BQ96NL0 473 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 CNOT10Q9H9A5 744 aaKnown RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 CCDC195A0A1B0GUA6 201 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 N4BP1O75113 896 aaKnown RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 CPP00450 1065 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 SERPING1P05155 500 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TCIRG1Q13488 830 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TSTA3Q13630 321 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 GRAMD1BQ3KR37 738 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 DHX40Q8IX18 779 aaKnown RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 RNF169Q8NCN4 708 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 SUPT20HQ8NEM7 779 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 CCDC87Q9NVE4 849 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 CCNL1Q9UK58 526 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 EVI5O60447 810 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 RNF8O76064 485 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 P4HA1P13674 534 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 ERFP50548 548 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 HSP90AA5PQ58FG0 334 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 SKA2Q8WVK7 121 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 COA7Q96BR5 231 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 TEKT3Q9BXF9 490 aa13.05□□□□□ -0.32
UBR4-205ENST00000417040 ZBTB12Q9Y330 459 aaPredicted RBP13.05□□□□□ -0.32
UBR4-205ENST00000417040 POLR2MP0CAP2 368 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 PSMC2P35998 433 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 CHRNDQ07001 517 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 DARS2Q6PI48 645 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 SPICE1Q8N0Z3 855 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 TBCKQ8TEA7 893 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 PBKQ96KB5 322 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 LBHD1Q9BQE6 289 aaPredicted RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 ECT2Q9H8V3 914 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 GINM1Q9NU53 330 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 PACSIN2Q9UNF0 486 aaPredicted RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 GDAQ9Y2T3 454 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 NPC1L1Q9UHC9 1359 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 PLCG1P19174 1290 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 HMGB2P26583 209 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 ATICP31939 592 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 LRRC14Q15048 493 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 UBE2SQ16763 222 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 MFSD14BQ5SR56 506 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 DEPDC1BQ8WUY9 529 aa13.04□□□□□ -0.32
UBR4-205ENST00000417040 METTL14Q9HCE5 456 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 DNMT1P26358 1616 aaKnown RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 HMGB1P1B2RPK0 211 aaPredicted RBP13.04□□□□□ -0.32
UBR4-205ENST00000417040 GOLGA8MH3BSY2 632 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms