RNA–Protein interactions for RNA: ENST00000416204.1

LINC01238-201, Transcript of long intergenic non-protein coding RNA 1238, humanhuman

TSL 2 BASIC

Gene LINC01238, Length 590 nt, Biotype lincRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01238-201ENST00000416204 B4DLN1 442 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 H3BNC9 293 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 GRM6O15303 877 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 LINC01565O15544 149 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 ORC4O43929 436 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 PARNO95453 639 aaKnown RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 F2P00734 622 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 MYCLP12524 364 aaPredicted RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 CTNNB1P35222 781 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 MRPL12P52815 198 aaKnown RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 MKRN4PQ13434 485 aaPredicted RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 STXBP2Q15833 593 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 CDC37Q16543 378 aaPredicted RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 ARHGEF16Q5VV41 709 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 FBXO11Q86XK2 927 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 RNF135Q8IUD6 432 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 SP7Q8TDD2 431 aaPredicted RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 RMDN3Q96TC7 470 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 IFIH1Q9BYX4 1025 aaKnown RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 VAT1LQ9HCJ6 419 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 CTNNA3Q9UI47 895 aa10.97□□□□□ -0.65
LINC01238-201ENST00000416204 SUPT16HQ9Y5B9 1047 aaKnown RBP10.97□□□□□ -0.65
LINC01238-201ENST00000416204 MYO7AQ13402 2215 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 WDR19Q8NEZ3 1342 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 HAS3O00219 553 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 HYAL1Q12794 435 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 HSDL1Q3SXM5 330 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 PLEKHG4Q58EX7 1191 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 MIER1Q8N108 512 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 PPTC7Q8NI37 304 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 NSUN6Q8TEA1 469 aaKnown RBP10.96□□□□□ -0.65
LINC01238-201ENST00000416204 GPKOWQ92917 476 aaPredicted RBP eCLIP10.96□□□□□ -0.65
LINC01238-201ENST00000416204 FAM227BQ96M60 508 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 MFSD14AQ96MC6 490 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 SPATA33Q96N06 139 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 KATNAL1Q9BW62 490 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 BCAS3Q9H6U6 928 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 DCTPP1Q9H773 170 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 ANAPC4Q9UJX5 808 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 FAM50BQ9Y247 325 aa10.96□□□□□ -0.65
LINC01238-201ENST00000416204 DMDP11532 3685 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 STXBP3O00186 592 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 TREHO43280 583 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 MBTPS2O43462 519 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 DHX16O60231 1041 aaKnown RBP10.95□□□□□ -0.66
LINC01238-201ENST00000416204 TBX10O75333 385 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 GGPS1O95749 300 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 CFBP00751 764 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 FGAP02671 866 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 SP2Q02086 613 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 LAMC2Q13753 1193 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 SERINC5Q86VE9 423 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 TBC1D10CQ8IV04 446 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 IL31RAQ8NI17 732 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 SEPT8Q92599 483 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 ATP6V0A1Q93050 837 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 TOP1MTQ969P6 601 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 PRKAG3Q9UGI9 489 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 ZNF318Q5VUA4 2279 aa10.95□□□□□ -0.66
LINC01238-201ENST00000416204 ABCB11O95342 1321 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 NEDD4P46934 1319 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 EMSYQ7Z589 1322 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 C17orf102A2RUQ5 167 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 TMEM221A6NGB7 291 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 M0R296 226 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 RGS20O76081 388 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 NR3C2P08235 984 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 SMIM10L2AP0DMW4 78 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 SMIM10L2BP0DMW5 78 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 SNHG28P0DPA3 235 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 HOXA13P31271 388 aaPredicted RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 COL19A1Q14993 1142 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 SMAD2Q15796 467 aaKnown RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 QRICH1Q2TAL8 776 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 HERC4Q5GLZ8 1057 aaPredicted RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 ADGRF4Q8IZF3 695 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 FIBCD1Q8N539 461 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 PBXIP1Q96AQ6 731 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 UPF3BQ9BZI7 483 aaKnown RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 ALG13Q9NP73 1137 aaKnown RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 PXMP2Q9NR77 195 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 TELO2Q9Y4R8 837 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 ZFHX2Q9C0A1 2572 aaPredicted RBP10.94□□□□□ -0.66
LINC01238-201ENST00000416204 MICAL3Q7RTP6 2002 aa10.94□□□□□ -0.66
LINC01238-201ENST00000416204 TTC41PQ6P2S7 1318 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 A0A0D9SFI3 127 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 EIF3JO75822 258 aaKnown RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 CENPBP07199 599 aaPredicted RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 FGRP09769 529 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 IBSPP21815 317 aaPredicted RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 TCF15Q12870 199 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 CELF3Q5SZQ8 465 aaKnown RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 MYSM1Q5VVJ2 828 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 ZNF589Q86UQ0 364 aaPredicted RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 TRIM50Q86XT4 487 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 RGS22Q8NE09 1264 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 EDAQ92838 391 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 EMID1Q96A84 441 aaPredicted RBP10.93□□□□□ -0.66
LINC01238-201ENST00000416204 IL17RAQ96F46 866 aa10.93□□□□□ -0.66
LINC01238-201ENST00000416204 SAMD11Q96NU1 681 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms