RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 ASTE1Q2TB18 679 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 C12orf60Q5U649 245 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 MCTP2Q6DN12 878 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 IQCKQ8N0W5 287 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 CCDC47Q96A33 483 aaKnown RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 JPH2Q9BR39 696 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 A0A1W2PQJ5 194 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 EDIL3O43854 480 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 NR1D1P20393 614 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 MAN2A1Q16706 1144 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 CCDC40Q4G0X9 1142 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 CNNM4Q6P4Q7 775 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 LRRC55Q6ZSA7 311 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 FBXO33Q7Z6M2 555 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 ZNF473Q8WTR7 871 aaKnown RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 ARAP2Q8WZ64 1704 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 ACTN3Q08043 901 aaPredicted RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 KIAA0753Q2KHM9 967 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 CFAP221Q4G0U5 840 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 ADAT2Q7Z6V5 191 aaKnown RBP16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 NEK8Q86SG6 692 aa16.09■□□□□ 0.17
SEMA3F-202ENST00000413852 USP17L5A8MUK1 530 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 KCNK3O14649 394 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 QPCTQ16769 361 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 FAM83BQ5T0W9 1011 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 EMBQ6PCB8 327 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 CALML4Q96GE6 196 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 CDK5RAP3Q96JB5 506 aa16.08■□□□□ 0.17
SEMA3F-202ENST00000413852 SNX29Q8TEQ0 813 aa16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 TRIM31Q9BZY9 425 aa16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 ATP8A2Q9NTI2 1148 aa16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 BSDC1Q9NW68 430 aaPredicted RBP16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 ARPP21Q9UBL0 812 aaPredicted RBP16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 SRP68Q9UHB9 627 aaKnown RBP16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 ANKRD36CQ5JPF3 1778 aa16.08■□□□□ 0.16
SEMA3F-202ENST00000413852 COPB2P35606 906 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 ERVK-9P63128 1117 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 IFT20Q8IY31 132 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 LARP4BQ92615 738 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 CCT8L2Q96SF2 557 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 ITGA4P13612 1032 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 HNRNPH3P31942 346 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 FNTAP49354 379 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 CAVIN3Q969G5 261 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 IKZF4Q9H2S9 585 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 GDF3Q9NR23 364 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 GRID2IPA4D2P6 1211 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 TNNI2P48788 182 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 CDK17Q00537 523 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 CALCRLQ16602 461 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 ALS2CLQ60I27 953 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 TBC1D9BQ66K14 1250 aa16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 DDX47Q9H0S4 455 aaKnown RBP16.07■□□□□ 0.16
SEMA3F-202ENST00000413852 A0A1B0GUL6 1792 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 PALM3A6NDB9 673 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 KIAA0754O94854 1291 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 RASA1P20936 1047 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 SKOR1P84550 965 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 PTGISQ16647 500 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 PARP10Q53GL7 1025 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 E9PMD0 336 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 CEP104O60308 925 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 FIGNQ5HY92 759 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 SFMBT2Q5VUG0 894 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 PTF1AQ7RTS3 328 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 NLRP14Q86W24 1093 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 DGKHQ86XP1 1220 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 LRRC47Q8N1G4 583 aaKnown RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 CELF4Q9BZC1 486 aaKnown RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 GPCPD1Q9NPB8 672 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 ECM2O94769 699 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 UAP1Q16222 522 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 GJB7Q6PEY0 223 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 ZNF572Q7Z3I7 529 aaPredicted RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 MYCBPAPQ8TBZ2 947 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 ZMYND12Q9H0C1 365 aa16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 CNOT8Q9UFF9 292 aaKnown RBP16.06■□□□□ 0.16
SEMA3F-202ENST00000413852 MEFVO15553 781 aaPredicted RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 LCA5LO95447 670 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 SF3B2Q13435 895 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 GBP6Q6ZN66 633 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 TULP1O00294 542 aaPredicted RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 PPP1R37O75864 691 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 EPB41P11171 864 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 PRLRP16471 622 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 RPS8P62241 208 aaKnown RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 SOGA3Q5TF21 947 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 UNC13DQ70J99 1090 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 MARCH10Q8NA82 808 aaPredicted RBP16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 MDM1Q8TC05 714 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 EPN3Q9H201 632 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 DPH5Q9H2P9 285 aa16.05■□□□□ 0.16
SEMA3F-202ENST00000413852 RAD21O60216 631 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 SLC9A1P19634 815 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 HSD17B3P37058 310 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 AMPD3Q01432 767 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 PAK2Q13177 524 aa16.04■□□□□ 0.16
SEMA3F-202ENST00000413852 SLC9C1Q4G0N8 1177 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms