RNA–Protein interactions for RNA: ENST00000413219.6

SDCBP-202, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SDCBP, Length 2,086 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-202ENST00000413219 TBCKQ8TEA7 893 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 PIK3R5Q8WYR1 880 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 CDK5RAP3Q96JB5 506 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 SAMM50Q9Y512 469 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 MYH10P35580 1976 aa19.45■□□□□ 0.7
SDCBP-202ENST00000413219 COL14A1Q05707 1796 aaKnown RBP19.44■□□□□ 0.7
SDCBP-202ENST00000413219 KRT14P02533 472 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 NAP1L1P55209 391 aaKnown RBP19.44■□□□□ 0.7
SDCBP-202ENST00000413219 PDIA5Q14554 519 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 SEPT2Q15019 361 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 TMEM266Q2M3C6 531 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 MEI1Q5TIA1 1274 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 SH2D3CQ8N5H7 860 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 RAD54LQ92698 747 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 ATP6V1G3Q96LB4 118 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 INPP4AQ96PE3 977 aaPredicted RBP19.44■□□□□ 0.7
SDCBP-202ENST00000413219 RAB34Q9BZG1 259 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 FAM153BP0C7A2 387 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 NR1D1P20393 614 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 TNNC1P63316 161 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 FAM153CQ494X1 144 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 OTUD6BQ8N6M0 293 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 RNPC3Q96LT9 517 aaKnown RBP19.44■□□□□ 0.7
SDCBP-202ENST00000413219 RABEP2Q9H5N1 569 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 FAM153AQ9UHL3 310 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 ATP6V0A2Q9Y487 856 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 COL4A3BPQ9Y5P4 624 aa19.44■□□□□ 0.7
SDCBP-202ENST00000413219 KAT6BQ8WYB5 2073 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 hCG_1984214I3L0E3 225 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 PALMO75781 387 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 PPP1R37O75864 691 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 MYBP10242 640 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 HSPA9P38646 679 aaKnown RBP19.43■□□□□ 0.7
SDCBP-202ENST00000413219 TXKP42681 527 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 CALCRLQ16602 461 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 ZCWPW2Q504Y3 356 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 LRIG3Q6UXM1 1119 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 REXO1Q8N1G1 1221 aaKnown RBP19.43■□□□□ 0.7
SDCBP-202ENST00000413219 ZNF713Q8N859 430 aaPredicted RBP19.43■□□□□ 0.7
SDCBP-202ENST00000413219 CASKIN2Q8WXE0 1202 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 ZNF287Q9HBT7 754 aa19.43■□□□□ 0.7
SDCBP-202ENST00000413219 WNK3Q9BYP7 1800 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 ROBO1Q9Y6N7 1651 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 BTNL10A8MVZ5 291 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TLR2O60603 784 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 FNTAP49354 379 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 ATP1A2P50993 1020 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 RPS8P62241 208 aaKnown RBP19.42■□□□□ 0.7
SDCBP-202ENST00000413219 FKBP3Q00688 224 aaKnown RBP19.42■□□□□ 0.7
SDCBP-202ENST00000413219 SLC18A3Q16572 532 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 PTGISQ16647 500 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 FAM83BQ5T0W9 1011 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 KCTD16Q68DU8 428 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 KCNV1Q6PIU1 500 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 IFT81Q8WYA0 676 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 CEP63Q96MT8 703 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 NCAPGQ9BPX3 1015 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TANGO6Q9C0B7 1094 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TFCP2L1Q9NZI6 479 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 SEC63Q9UGP8 760 aaKnown RBP19.42■□□□□ 0.7
SDCBP-202ENST00000413219 STX8Q9UNK0 236 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 MYH14Q7Z406 1995 aaKnown RBP19.42■□□□□ 0.7
SDCBP-202ENST00000413219 RGL2O15211 777 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 NOL4O94818 638 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 GNA14O95837 355 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 RASA1P20936 1047 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TMEM119Q4V9L6 283 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 NAA35Q5VZE5 725 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 PPP4R3AQ6IN85 833 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 DYMQ7RTS9 669 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 MYOCDQ8IZQ8 938 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 KRT12Q99456 494 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TMEM59LQ9UK28 342 aa19.42■□□□□ 0.7
SDCBP-202ENST00000413219 TAF1P21675 1872 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 GOLGA8HP0CJ92 632 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 MDH1P40925 334 aaKnown RBP19.41■□□□□ 0.7
SDCBP-202ENST00000413219 MARSP56192 900 aaKnown RBP19.41■□□□□ 0.7
SDCBP-202ENST00000413219 PPP4CP60510 307 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 SLC4A8Q2Y0W8 1093 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 ARFGAP2Q8N6H7 521 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 USP38Q8NB14 1042 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 PLCB1Q9NQ66 1216 aa19.41■□□□□ 0.7
SDCBP-202ENST00000413219 GSTO1P78417 241 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 ATP2B2Q01814 1243 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 FBXW10Q5XX13 1052 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 CCDC91Q7Z6B0 441 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 SH3RF3Q8TEJ3 882 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-202ENST00000413219 ZNF473Q8WTR7 871 aaKnown RBP19.4■□□□□ 0.7
SDCBP-202ENST00000413219 DDX12PQ92771 950 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 NLRC4Q9NPP4 1024 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 CAPN7Q9Y6W3 813 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 BAG3O95817 575 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 KLRC1P26715 233 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 CCDC40Q4G0X9 1142 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 KRT79Q5XKE5 535 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 C3orf20Q8ND61 904 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 CDCA7Q9BWT1 371 aaPredicted RBP19.4■□□□□ 0.7
SDCBP-202ENST00000413219 LSM14BQ9BX40 385 aaKnown RBP19.4■□□□□ 0.7
SDCBP-202ENST00000413219 ISCUQ9H1K1 167 aa19.4■□□□□ 0.7
SDCBP-202ENST00000413219 TAF1DQ9H5J8 278 aaPredicted RBP19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms