RNA–Protein interactions for RNA: ENST00000412685.6

HCG18-233, Transcript of HLA complex group 18, human

TSL 2 BASIC

Gene HCG18, Length 2,552 nt, Biotype antisense RNA, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HCG18-233	ENST00000412685	FAM26F	Q5R3K3	315 aa		18.31	■□□□□ 0.52
HCG18-233	ENST00000412685	GPR161	Q8N6U8	529 aa	Known RBP	18.31	■□□□□ 0.52
HCG18-233	ENST00000412685	ETNPPL	Q8TBG4	499 aa		18.31	■□□□□ 0.52
HCG18-233	ENST00000412685	TSG101	Q99816	390 aa		18.31	■□□□□ 0.52
HCG18-233	ENST00000412685	TUBB2B	Q9BVA1	445 aa		18.31	■□□□□ 0.52
HCG18-233	ENST00000412685	SPDYE3	A6NKU9	549 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	HERVK_113	P62684	666 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	BTNL9	Q6UXG8	535 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	GOLGA1	Q92805	767 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	IQCD	Q96DY2	449 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	NAPG	Q99747	312 aa	Predicted RBP	18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	EPC1	Q9H2F5	836 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	RGPD3	A6NKT7	1758 aa	Predicted RBP	18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	RGPD4	Q7Z3J3	1758 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	FOS	P01100	380 aa	Predicted RBP	18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	SREBF1	P36956	1147 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	MMP14	P50281	582 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	SRGAP1	Q7Z6B7	1085 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	SPICE1	Q8N0Z3	855 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	RABGGTA	Q92696	567 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	HAUS4	Q9H6D7	363 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	XPO5	Q9HAV4	1204 aa	Known RBP eCLIP	18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	TMOD2	Q9NZR1	351 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	TRIM10	Q9UDY6	481 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	HERC5	Q9UII4	1024 aa	Known RBP	18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	GUCA1B	Q9UMX6	200 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	SIK3	Q9Y2K2	1263 aa		18.3	■□□□□ 0.52
HCG18-233	ENST00000412685	TCP10L2	B9ZVM9	353 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	MED24	O75448	989 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	TAL1	P17542	331 aa	Predicted RBP	18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	KRT83	P78385	493 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	SPIRE1	Q08AE8	756 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685		Q4G0T1	1027 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	ZCWPW2	Q504Y3	356 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	GPBP1	Q86WP2	473 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	CCDC65	Q8IXS2	484 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	LENG9	Q96B70	501 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	FAM53C	Q9NYF3	392 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	SYNPO2	Q9UMS6	1093 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	SPDYE2B	A6NHP3	402 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	TBX3	O15119	743 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	SPDYE6	P0CI01	402 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	CYLC1	P35663	651 aa	Predicted RBP	18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	CHMP4BP1	P59074	171 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	HAUS3	Q68CZ6	603 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	CCDC170	Q8IYT3	715 aa		18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	NHEJ1	Q9H9Q4	299 aa	Predicted RBP	18.29	■□□□□ 0.52
HCG18-233	ENST00000412685	POTEF	A5A3E0	1075 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	FAM86B1	E9PN63	330 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	OPLAH	O14841	1288 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	FAM86B2	P0C5J1	330 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	POTEI	P0CG38	1075 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	POTEG	Q6S5H5	508 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	POTEE	Q6S8J3	1075 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	TMCO3	Q6UWJ1	677 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	CCDC84	Q86UT8	332 aa	Predicted RBP	18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	KRT222	Q8N1A0	295 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	CEP112	Q8N8E3	955 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	ZSWIM4	Q9H7M6	989 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	PRR12	Q9ULL5	1215 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	CLRN2	A0PK11	232 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	CYP11B2	P19099	503 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	CDK17	Q00537	523 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	RSBN1L	Q6PCB5	846 aa	Predicted RBP	18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	FGFBP2	Q9BYJ0	223 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	FAM207A	Q9NSI2	230 aa	Predicted RBP	18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	STK32B	Q9NY57	414 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	TBC1D7	Q9P0N9	293 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	PCDHA2	Q9Y5H9	948 aa		18.28	■□□□□ 0.52
HCG18-233	ENST00000412685	NPHP3-ACAD11	A0A0J9YXS1	232 aa		18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	HOXA13	P31271	388 aa	Predicted RBP	18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	ECE1	P42892	770 aa		18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	FKBP3	Q00688	224 aa	Known RBP	18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	BMS1	Q14692	1282 aa	Known RBP	18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	EZH2	Q15910	746 aa	Known RBP	18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	CCDC122	Q5T0U0	273 aa		18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	PUF60	Q9UHX1	559 aa	Known RBP	18.27	■□□□□ 0.52
HCG18-233	ENST00000412685	EIF3CL	B5ME19	914 aa	Known RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	EPHB6	O15197	1021 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	IPO7	O95373	1038 aa	Known RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	ZSCAN20	P17040	1043 aa	Predicted RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	SLC12A3	P55017	1021 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	CACNB1	Q02641	598 aa	Predicted RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	HERC4	Q5GLZ8	1057 aa	Predicted RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	NCAPH2	Q6IBW4	605 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	ZNF662	Q6ZS27	426 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	KIAA1328	Q86T90	577 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	CATSPER3	Q86XQ3	398 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	ERMN	Q8TAM6	284 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	EIF3C	Q99613	913 aa	Known RBP	18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	ARHGEF10L	Q9HCE6	1279 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	TFR2	Q9UP52	801 aa		18.27	■□□□□ 0.51
HCG18-233	ENST00000412685	TRAF5	O00463	557 aa		18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	RAD17	O75943	681 aa		18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	ZRANB2	O95218	330 aa	Known RBP eCLIP	18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	ERCC3	P19447	782 aa		18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	HNRNPH3	P31942	346 aa	Known RBP	18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	CIITA	P33076	1130 aa		18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	STAT2	P52630	851 aa		18.26	■□□□□ 0.51
HCG18-233	ENST00000412685	RAD51AP2	Q09MP3	1159 aa		18.26	■□□□□ 0.51

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