RNA–Protein interactions for RNA: ENST00000412615.6

TRAFD1-202, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene TRAFD1, Length 2,697 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-202ENST00000412615 LRRC55Q6ZSA7 311 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 CCDC65Q8IXS2 484 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 HNRNPLLQ8WVV9 542 aaKnown RBP12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 GJA10Q969M2 543 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 MBOAT7Q96N66 472 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 AMNQ9BXJ7 453 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 ANKZF1Q9H8Y5 726 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 KIAA1024Q9UPX6 916 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 F5H6K3 240 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 NKRFO15226 690 aaKnown RBP eCLIP12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 APBA3O96018 575 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 KLRC3Q07444 240 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 STYK1Q6J9G0 422 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SH3BP5LQ7L8J4 393 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 TRAPPC11Q7Z392 1133 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 SIAH1Q8IUQ4 282 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 TSGA10Q9BZW7 698 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 MMRN2Q9H8L6 949 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 RAB21Q9UL25 225 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 PCDHAC2Q9Y5I4 1007 aa12.75□□□□□ -0.37
TRAFD1-202ENST00000412615 MYH4Q9Y623 1939 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 ADAMTSL1Q8N6G6 1762 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 KIF20AO95235 890 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 PLA2G4BP0C869 781 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 KIF5AQ12840 1032 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 ABCB5Q2M3G0 1257 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 GMCL1P1Q8NEA9 526 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 PRDM4Q9UKN5 801 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 BRWD3Q6RI45 1802 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 E9PMD0 336 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 MEIS2O14770 477 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 ERLIN1O75477 346 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 VAV2P52735 878 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 HAUS3Q68CZ6 603 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 GMCL1Q96IK5 515 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 EDEM3Q9BZQ6 932 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 FAM207AQ9NSI2 230 aaPredicted RBP12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 COL4A3BPQ9Y5P4 624 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 SAR1BQ9Y6B6 198 aa12.74□□□□□ -0.37
TRAFD1-202ENST00000412615 TRAF5O00463 557 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 TBX3O15119 743 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 FOSP01100 380 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ARHGAP4P98171 946 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 LONRF2Q1L5Z9 754 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ZCWPW2Q504Y3 356 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 PAPD7Q5XG87 772 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 GLIS3Q8NEA6 775 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 FUT8Q9BYC5 575 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 LACRTQ9GZZ8 138 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 TFR2Q9UP52 801 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 USO1O60763 962 aaKnown RBP12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ENTPD3O75355 529 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 SASH3O75995 380 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 GNA14O95837 355 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 SHROOM1Q2M3G4 852 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ARHGAP27Q6ZUM4 889 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ZNF771Q7L3S4 317 aaPredicted RBP12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 GPBP1Q86WP2 473 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 FBXO11Q86XK2 927 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 NEK11Q8NG66 645 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 ERMNQ8TAM6 284 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 CRYGNQ8WXF5 182 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 CEP63Q96MT8 703 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 TANGO6Q9C0B7 1094 aa12.73□□□□□ -0.37
TRAFD1-202ENST00000412615 COL11A2P13942 1736 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 EP400Q96L91 3159 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 POTEB3A0JP26 581 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 ANO9A1A5B4 782 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 POTECB2RU33 542 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 IKQ13123 557 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 CCDC40Q4G0X9 1142 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 HERC4Q5GLZ8 1057 aaPredicted RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 MSL1Q68DK7 614 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 NCAPH2Q6IBW4 605 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 POTEBQ6S5H4 581 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 GBP3Q9H0R5 595 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 DEF6Q9H4E7 631 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 ST7Q9NRC1 585 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 STK24Q9Y6E0 443 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 MYH7BA7E2Y1 1941 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 PITPNM2Q9BZ72 1349 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 RCCD1A6NED2 376 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 SPDYE3A6NKU9 549 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 ENC1O14682 589 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 GDF11O95390 407 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 NDUFB10O96000 172 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 TFRCP02786 760 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 ATP1A1P05023 1023 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 KRT18P05783 430 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 CYP11B2P19099 503 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 CYP27A1Q02318 531 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 Q4G0T1 1027 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 RBM26Q5T8P6 1007 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 SYDE2Q5VT97 1194 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 RRAGAQ7L523 313 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 CACNA2D4Q7Z3S7 1137 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 CNKSR1Q969H4 720 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 RPGRIP1Q96KN7 1286 aa12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 PURBQ96QR8 312 aaKnown RBP12.72□□□□□ -0.37
TRAFD1-202ENST00000412615 UBXN6Q9BZV1 441 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms