RNA–Protein interactions for RNA: ENST00000412570.5

SMPD4-203, Transcript of sphingomyelin phosphodiesterase 4, humanhuman

TSL 2

Gene SMPD4, Length 3,601 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD4-203ENST00000412570 NR3C2P08235 984 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 SNAPC2Q13487 334 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 CEP55Q53EZ4 464 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 CYFIP1Q7L576 1253 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 MTMR8Q96EF0 704 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 SPATC1LQ9H0A9 340 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 GINS2Q9Y248 185 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 LAMA3Q16787 3333 aa10.9□□□□□ -0.66
SMPD4-203ENST00000412570 RSPH10B2B2RC85 870 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 RSPH10BP0C881 870 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 MRPS9P82933 396 aaKnown RBP10.9□□□□□ -0.67
SMPD4-203ENST00000412570 GALNT17Q6IS24 598 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 BTNL9Q6UXG8 535 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 ACAD9Q9H845 621 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 ANO10Q9NW15 660 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 FANCLQ9NW38 375 aa10.9□□□□□ -0.67
SMPD4-203ENST00000412570 SPDYE5A6NIY4 337 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 NPEPPSP55786 919 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 IGBP1P78318 339 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 GPBP1Q86WP2 473 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 TRIM50Q86XT4 487 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 MMTAG2Q9BU76 263 aaKnown RBP10.89□□□□□ -0.67
SMPD4-203ENST00000412570 SAMSN1Q9NSI8 373 aaKnown RBP10.89□□□□□ -0.67
SMPD4-203ENST00000412570 TRAPPC10P48553 1259 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 MAP3K10Q02779 954 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 PPATQ06203 517 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 KCTD2Q14681 263 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 ARID5BQ14865 1188 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 TAF1CQ15572 869 aaPredicted RBP10.89□□□□□ -0.67
SMPD4-203ENST00000412570 LY6KQ17RY6 165 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 DPP9Q86TI2 863 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 DAGLBQ8NCG7 672 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 FAM200AQ8TCP9 573 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 PTPN18Q99952 460 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 PDGFCQ9NRA1 345 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 RBPJLQ9UBG7 517 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 HPSEQ9Y251 543 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 CD44P16070 742 aaKnown RBP10.89□□□□□ -0.67
SMPD4-203ENST00000412570 CYP2B6P20813 491 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 GRB10Q13322 594 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 NAALADL2Q58DX5 795 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 MIER3Q7Z3K6 550 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 CATSPER3Q86XQ3 398 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 RAB34Q9BZG1 259 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 HOOK1Q9UJC3 728 aaKnown RBP10.89□□□□□ -0.67
SMPD4-203ENST00000412570 IVNS1ABPQ9Y6Y0 642 aa10.89□□□□□ -0.67
SMPD4-203ENST00000412570 FSD2A1L4K1 749 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 ZBTB22O15209 634 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 USO1O60763 962 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 SLFN14P0C7P3 912 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 CLK2P49760 499 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 PGM5Q15124 567 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 UNC45AQ9H3U1 944 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 PPP2R3BQ9Y5P8 575 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 LONP1P36776 959 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 HERC4Q5GLZ8 1057 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 CHADLQ6NUI6 762 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 RDH13Q8NBN7 331 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 RBM46Q8TBY0 533 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 ZC3H15Q8WU90 426 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 PNMA5Q96PV4 448 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 PDCD2LQ9BRP1 358 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 FGFBP2Q9BYJ0 223 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 IFNKQ9P0W0 207 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 ZHX1Q9UKY1 873 aaPredicted RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 ESYT2A0FGR8 921 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 MYMKA6NI61 221 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 SMARCA1P28370 1054 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 DPYDQ12882 1025 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 KMT5BQ4FZB7 885 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 SV2BQ7L1I2 683 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 LARP4BQ92615 738 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 EIF2AK1Q9BQI3 630 aaKnown RBP10.88□□□□□ -0.67
SMPD4-203ENST00000412570 GPRC5CQ9NQ84 441 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 CYP39A1Q9NYL5 469 aa10.88□□□□□ -0.67
SMPD4-203ENST00000412570 LETM1O95202 739 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-203ENST00000412570 BMP15O95972 392 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 RPN1P04843 607 aaKnown RBP10.87□□□□□ -0.67
SMPD4-203ENST00000412570 OSBPP22059 807 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 SREBF1P36956 1147 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 MCF2L2Q86YR7 1114 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 DDX12PQ92771 950 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 PXMP2Q9NR77 195 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 EXOC1Q9NV70 894 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 WRAP73Q9P2S5 460 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-203ENST00000412570 NFE2L3Q9Y4A8 694 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 PITPNM2Q9BZ72 1349 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 CNGA1P29973 690 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 STK4Q13043 487 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 ITGB3BPQ13352 177 aaPredicted RBP10.87□□□□□ -0.67
SMPD4-203ENST00000412570 ENOX2Q16206 610 aaKnown RBP10.87□□□□□ -0.67
SMPD4-203ENST00000412570 TKFCQ3LXA3 575 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 SWSAP1Q6NVH7 229 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 NLRX1Q86UT6 975 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 MTMR9Q96QG7 549 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 MMP19Q99542 508 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 KIFC3Q9BVG8 833 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 VPS16Q9H269 839 aa10.87□□□□□ -0.67
SMPD4-203ENST00000412570 FOSP01100 380 aaPredicted RBP10.86□□□□□ -0.67
SMPD4-203ENST00000412570 YY1P25490 414 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms