RNA–Protein interactions for RNA: ENST00000412272.6

HERC4-205, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 1 (best) BASIC

Gene HERC4, Length 4,211 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-205ENST00000412272 TTC7AQ9ULT0 858 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 FADS3Q9Y5Q0 445 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 USP16Q9Y5T5 823 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 EMILIN1Q9Y6C2 1016 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 NCK2O43639 380 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SCTRP47872 440 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD20A2Q5SQ80 823 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 DEPDC1Q5TB30 811 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD20A1Q5TYW2 823 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 TTC39BQ5VTQ0 682 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 ANKRD20A3Q5VUR7 823 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 TWF2Q6IBS0 349 aaKnown RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 UBE3BQ7Z3V4 1068 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SPICE1Q8N0Z3 855 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SCAIQ8N9R8 606 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PRPF18Q99633 342 aaKnown RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 RTFDC1Q9BY42 306 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 NDST4Q9H3R1 872 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 DISC1Q9NRI5 854 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CABP1Q9NZU7 370 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CFDP1Q9UEE9 299 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 BAIAP2L1Q9UHR4 511 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 NPATQ14207 1427 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 KANSL1LA0AUZ9 987 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 M0QX08 132 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 IGF2BP3O00425 579 aaKnown RBP eCLIP5.72□□□□□ -1.49
HERC4-205ENST00000412272 CYTH3O43739 400 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 DDX5P17844 614 aaKnown RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 PDCP20941 246 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 MZF1P28698 734 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 CHKAP35790 457 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PDE1AP54750 535 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 NLRP5P59047 1200 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CEBPZQ03701 1054 aaKnown RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 TBX2Q13207 712 aaPredicted RBP5.72□□□□□ -1.49
HERC4-205ENST00000412272 ANKDD1AQ495B1 522 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SPECC1Q5M775 1068 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 PDXDC1Q6P996 788 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 GLMNQ92990 594 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SKA1Q96BD8 255 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 TMEM87BQ96K49 555 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 SIKE1Q9BRV8 207 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 CARD9Q9H257 536 aa5.72□□□□□ -1.49
HERC4-205ENST00000412272 ARHGEF10O15013 1369 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 MAGI1Q96QZ7 1491 aaPredicted RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 CHMP4BP1P59074 171 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 PDE4DQ08499 809 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 ZBTB17Q13105 803 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 CEP85Q6P2H3 762 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 CCDC174Q6PII3 467 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 VASH1Q7L8A9 365 aaPredicted RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 RASGRP2Q7LDG7 609 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 PHF6Q8IWS0 365 aaKnown RBP eCLIP5.71□□□□□ -1.49
HERC4-205ENST00000412272 ZNF473Q8WTR7 871 aaKnown RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 IRGQQ8WZA9 623 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 BRF1Q92994 677 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 CCDC42Q96M95 316 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 HGH1Q9BTY7 390 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 CEP44Q9C0F1 390 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 NDEL1Q9GZM8 345 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 TUT1Q9H6E5 874 aaKnown RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 HYPKQ9NX55 129 aa5.71□□□□□ -1.49
HERC4-205ENST00000412272 PPP1R1BQ9UD71 204 aaPredicted RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 SEC63Q9UGP8 760 aaKnown RBP5.71□□□□□ -1.49
HERC4-205ENST00000412272 NCKAP5LQ9HCH0 1330 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 ARHGEF28Q8N1W1 1705 aaKnown RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 PPLO60437 1756 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 ENPP3O14638 875 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 COL6A2P12110 1019 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 CD53P19397 219 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 TKTP29401 623 aaKnown RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 STAT3P40763 770 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 MAP3K12Q12852 859 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 DAB2IPQ5VWQ8 1189 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 PPP2R2DQ66LE6 453 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 IFT81Q8WYA0 676 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 PTPRN2Q92932 1015 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 TSR2Q969E8 191 aaKnown RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 VCX3AQ9NNX9 186 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 KCTD5Q9NXV2 234 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 CDC23Q9UJX2 597 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 TMA7Q9Y2S6 64 aaKnown RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 NEXMIFQ5QGS0 1516 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 RASA4BC9J798 803 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 GOLGA8KD6RF30 607 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 STX10O60499 249 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 ASLP04424 464 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 KIF5BP33176 963 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 GGCXP38435 758 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 RFC5P40937 340 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 HPCAP84074 193 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 SP140Q13342 867 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 SIM2Q14190 667 aaPredicted RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 ARL13BQ3SXY8 428 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 OTUD7BQ6GQQ9 843 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 SIGIRRQ6IA17 410 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 REM2Q8IYK8 340 aaPredicted RBP5.71□□□□□ -1.5
HERC4-205ENST00000412272 ENGASEQ8NFI3 743 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 FAM129AQ9BZQ8 928 aa5.71□□□□□ -1.5
HERC4-205ENST00000412272 KRT82Q9NSB4 513 aa5.71□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms