RNA–Protein interactions for RNA: ENST00000410828.1

RNU4-53P-201, Transcript of RNA, U4 small nuclear 53, pseudogene, humanhuman

BASIC

Gene RNU4-53P, Length 140 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-53P-201ENST00000410828 ADAM15Q13444 863 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 LAMC2Q13753 1193 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MBTPS1Q14703 1052 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MFSD10Q14728 455 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CBX2Q14781 532 aaPredicted RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 STXBP2Q15833 593 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 LY6KQ17RY6 165 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CCDC96Q2M329 555 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLEKHG4Q58EX7 1191 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SYDE2Q5VT97 1194 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MCTP2Q6DN12 878 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 BTNL9Q6UXG8 535 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SLC30A10Q6XR72 485 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SEPT14Q6ZU15 432 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CHST3Q7LGC8 479 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ASCL5Q7RTU5 278 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZBTB33Q86T24 672 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SERINC5Q86VE9 423 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 IFNL3Q8IZI9 196 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 FIBCD1Q8N539 461 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SMRP1Q8NCR6 262 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RGS22Q8NE09 1264 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPTC7Q8NI37 304 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 NSUN6Q8TEA1 469 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 DCAF4Q8WV16 495 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLEC4DQ8WXI8 215 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 APPBP2Q92624 585 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 APBB2Q92870 758 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 NKD2Q969F2 451 aaPredicted RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 CHMP4CQ96CF2 233 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ASIC4Q96FT7 647 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MSLNLQ96KJ4 702 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RPGRIP1Q96KN7 1286 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RIPOR3Q96MK2 946 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PHF7Q9BWX1 381 aaPredicted RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLVAPQ9BX97 442 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MAF1Q9H063 256 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 NAPBQ9H115 298 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 RANBP17Q9H2T7 1088 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 ALG13Q9NP73 1137 aaKnown RBP2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MTMR7Q9Y216 660 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 MCM3APO60318 1980 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 SCN10AQ9Y5Y9 1956 aa2.79□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLIN4Q96Q06 1357 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 FAM208BQ5VWN6 2430 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 CDK5RAP2Q96SN8 1893 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ADGRA3Q8IWK6 1321 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 WDR19Q8NEZ3 1342 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 FOCADQ5VW36 1801 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 LOC101059915A0A1B0GWI6 518 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 FSD2A1L4K1 749 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 HAS3O00219 553 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 LINC01565O15544 149 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 GPAA1O43292 621 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 RANBP6O60518 1105 aaKnown RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 NMT2O60551 498 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 EIF3JO75822 258 aaKnown RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 CSPG5O95196 566 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 NR3C2P08235 984 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 LINC00271P0C7V0 271 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF286BP0CG31 522 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 GNAT1P11488 350 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 RLBP1P12271 317 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 HOXD8P13378 290 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATF7P17544 494 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 GTF2F1P35269 517 aaKnown RBP eCLIP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 NRIP1P48552 1158 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ZNF200P98182 395 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 PPARAQ07869 468 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 BTG3Q14201 252 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 PTPN21Q16825 1174 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 NAALADL2Q58DX5 795 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ARHGEF16Q5VV41 709 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 TTBK2Q6IQ55 1244 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 KCNV1Q6PIU1 500 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 DGLUCYQ7Z3D6 616 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 RBM23Q86U06 439 aaKnown RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 MCF2L2Q86YR7 1114 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 UBALD2Q8IYN6 164 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ADSSL1Q8N142 457 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 EFHBQ8N7U6 833 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 KBTBD3Q8NAB2 608 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 SYTL5Q8TDW5 730 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 MICAL1Q8TDZ2 1067 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLP1Q92989 425 aaKnown RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ATP6V0A1Q93050 837 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 P2RX5Q93086 422 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 WNT8BQ93098 351 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 OSBP2Q969R2 916 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 EMID1Q96A84 441 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 SPATA33Q96N06 139 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 IWS1Q96ST2 819 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 RMDN3Q96TC7 470 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 EPB41L4AQ9HCS5 686 aaPredicted RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 GPCPD1Q9NPB8 672 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 INCENPQ9NQS7 918 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 ECHDC1Q9NTX5 307 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 CLEC1BQ9P126 229 aa2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 DDX41Q9UJV9 622 aaKnown RBP2.78□□□□□ -1.96
RNU4-53P-201ENST00000410828 PLAGL2Q9UPG8 496 aa2.78□□□□□ -1.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms