RNA–Protein interactions for RNA: ENST00000410299.1

RNU2-54P-201, Transcript of RNA, U2 small nuclear 54, pseudogene, humanhuman

BASIC

Gene RNU2-54P, Length 190 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU2-54P-201ENST00000410299 RPL13P26373 211 aaKnown RBP3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 CNR2P34972 360 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 ITGA1P56199 1179 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 GJA9P57773 515 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 DDR2Q16832 855 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 CR1LQ2VPA4 569 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZFYVE27Q5T4F4 411 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 STEAP3Q658P3 488 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 MCTP2Q6DN12 878 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZC3H18Q86VM9 953 aaKnown RBP3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 FAM126BQ8IXS8 530 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 SLC43A3Q8NBI5 491 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 ADAMTS17Q8TE56 1095 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 KCTD13Q8WZ19 329 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 GMLQ99445 158 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 YIPF4Q9BSR8 244 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 JAM3Q9BX67 310 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 CDIP1Q9H305 208 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 NPFFR2Q9Y5X5 522 aa3.27□□□□□ -1.89
RNU2-54P-201ENST00000410299 H7BY64 318 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 DDX3XO00571 662 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 TADA3O75528 432 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 DGKIO75912 1065 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 NKX3-2P78367 333 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 NFKB2Q00653 900 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 MAP4K2Q12851 820 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 ADAM9Q13443 819 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 RGL3Q3MIN7 710 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 PRR31Q5SQ13 230 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 USP53Q70EK8 1073 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 TTLL6Q8N841 843 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 PPIL4Q8WUA2 492 aaKnown RBP eCLIP3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 TOE1Q96GM8 510 aaKnown RBP3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZSWIM3Q96MP5 696 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 PCDH18Q9HCL0 1135 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 PPARGC1AQ9UBK2 798 aaKnown RBP3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZNF652Q9Y2D9 606 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 PCDHB4Q9Y5E5 795 aa3.26□□□□□ -1.89
RNU2-54P-201ENST00000410299 BLACEA4D250 179 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 PRODHO43272 600 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 EFEMP1Q12805 493 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 HSP90AA2PQ14568 343 aaPredicted RBP3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 CHRNA2Q15822 529 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 EMC4Q5J8M3 183 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 YOD1Q5VVQ6 348 aaPredicted RBP3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 TEPPQ6URK8 271 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 KCNT2Q6UVM3 1135 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 RBM12BQ8IXT5 1001 aaKnown RBP3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 TXNDC5Q8NBS9 432 aaKnown RBP3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 OSBP2Q969R2 916 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 PHF20Q9BVI0 1012 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 EPB41L1Q9H4G0 881 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 ARHGEF4Q9NR80 690 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 GPR27Q9NS67 375 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 IGSF5Q9NSI5 407 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 DTLQ9NZJ0 730 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 MYOTQ9UBF9 498 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 RBPJLQ9UBG7 517 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 WASF3Q9UPY6 502 aa3.25□□□□□ -1.89
RNU2-54P-201ENST00000410299 K7ESM1 405 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 LRG1P02750 347 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 PABPC1P11940 636 aaKnown RBP3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 GRIN1Q05586 938 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 NTRK3Q16288 839 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 PRAMEF18Q5VWM3 479 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 HHIPL2Q6UWX4 724 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 TMC5Q6UXY8 1006 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 GGNQ86UU5 652 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 PIP4K2CQ8TBX8 421 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 BORCS6Q96GS4 357 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 SGSM3Q96HU1 749 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 KCNJ15Q99712 375 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 AARSD1Q9BTE6 412 aaKnown RBP3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 SMOC1Q9H4F8 434 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 NGRNQ9NPE2 291 aaKnown RBP3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 INVSQ9Y283 1065 aa3.24□□□□□ -1.89
RNU2-54P-201ENST00000410299 IQCA1LA6NCM1 817 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 MROH6A6NGR9 719 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 SLC27A2O14975 620 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 LTFP02788 710 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 ITGB3P05106 788 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 ADRB1P08588 477 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 FGFR1P11362 822 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 COL6A2P12110 1019 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 ZNF28P17035 718 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 IL13P35225 146 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 MLLT6P55198 1093 aaPredicted RBP3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 KIAA2012Q0VF49 1180 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 RAB33AQ14088 237 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 SPATS1Q496A3 300 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 TBC1D10BQ4KMP7 808 aaPredicted RBP3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 FAM26FQ5R3K3 315 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 PHF19Q5T6S3 580 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 NSMFQ6X4W1 530 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 LBX2Q6XYB7 198 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 SPATC1Q76KD6 591 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 PHOSPHO1Q8TCT1 267 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 DCAF4Q8WV16 495 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 CLEC4DQ8WXI8 215 aa3.23□□□□□ -1.89
RNU2-54P-201ENST00000410299 CLIC6Q96NY7 704 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms