RNA–Protein interactions for RNA: ENST00000409954.6

MCF2L-210, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 5

Gene MCF2L, Length 574 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-210ENST00000409954 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
MCF2L-210ENST00000409954 LAMA4Q16363 1823 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 ICAM3P32942 547 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 RABGGTBP53611 331 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 SP2Q02086 613 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 NECTIN1Q15223 517 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 HSDL1Q3SXM5 330 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 PPP2R2DQ66LE6 453 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 ESYT1Q9BSJ8 1104 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 USP26Q9BXU7 913 aa16.76■□□□□ 0.27
MCF2L-210ENST00000409954 LSG1Q9H089 658 aaKnown RBP16.76■□□□□ 0.27
MCF2L-210ENST00000409954 SEC63Q9UGP8 760 aaKnown RBP16.76■□□□□ 0.27
MCF2L-210ENST00000409954 SCN10AQ9Y5Y9 1956 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 SPATA31C2B4DYI2 1134 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 PIK3CDO00329 1044 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 SLC27A2O14975 620 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 IGFBP4P22692 258 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 LRRC8DQ7L1W4 858 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 SMARCC2Q8TAQ2 1214 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 INPP4AQ96PE3 977 aaPredicted RBP16.75■□□□□ 0.27
MCF2L-210ENST00000409954 CTAGE1Q96RT6 745 aa16.75■□□□□ 0.27
MCF2L-210ENST00000409954 EFCAB14O75071 495 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 CKBP12277 381 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 RNF20Q5VTR2 975 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 CREB3L3Q68CJ9 461 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 GIMAP8Q8ND71 665 aaPredicted RBP16.74■□□□□ 0.27
MCF2L-210ENST00000409954 IL31RAQ8NI17 732 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 ATXN2LQ8WWM7 1075 aaKnown RBP16.74■□□□□ 0.27
MCF2L-210ENST00000409954 PIBF1Q8WXW3 757 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 SENP7Q9BQF6 1050 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 C16orf70Q9BSU1 422 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 SLC12A7Q9Y666 1083 aa16.74■□□□□ 0.27
MCF2L-210ENST00000409954 ABHD14A-ACY1A0A1B0GW23 586 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 H3BRB1 525 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 NOP56O00567 594 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 SH2B2O14492 632 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 FIBPO43427 364 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 CXCL10P02778 98 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 UBA1P22314 1058 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 KCNJ6P48051 423 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 MRPS9P82933 396 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 ADGRE1Q14246 886 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 PCNX4Q63HM2 1172 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 CNKSR3Q6P9H4 555 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 METTL7BQ6UX53 244 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 SYNE3Q6ZMZ3 975 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 NLRX1Q86UT6 975 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 HERC6Q8IVU3 1022 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 DHX38Q92620 1227 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 TUT1Q9H6E5 874 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 PSTPIP2Q9H939 334 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 RTEL1Q9NZ71 1219 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 LAMA2P24043 3122 aaKnown RBP16.73■□□□□ 0.27
MCF2L-210ENST00000409954 A0A0C4DFX4 3053 aa16.73■□□□□ 0.27
MCF2L-210ENST00000409954 FRMPD4Q14CM0 1322 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 MEIS2O14770 477 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 ZNF286BP0CG31 522 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 GNAT1P11488 350 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 MYOGP15173 224 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 POU3F3P20264 500 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-210ENST00000409954 IKBKEQ14164 716 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 GPNMBQ14956 572 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 BMP2KLQ5H9B9 411 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 TJAP1Q5JTD0 557 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 USP17L6PQ6QN14 398 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 CENPQQ7L2Z9 268 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-210ENST00000409954 SRBD1Q8N5C6 995 aaKnown RBP16.72■□□□□ 0.27
MCF2L-210ENST00000409954 FANCBQ8NB91 859 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 PPM1EQ8WY54 764 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 ZFP91Q96JP5 570 aaPredicted RBP16.72■□□□□ 0.27
MCF2L-210ENST00000409954 MYL10Q9BUA6 226 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 ANO2Q9NQ90 1003 aa16.72■□□□□ 0.27
MCF2L-210ENST00000409954 C17orf102A2RUQ5 167 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 MAFGO15525 162 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 CYFIP1Q7L576 1253 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 SGMS1Q86VZ5 419 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 TEX2Q8IWB9 1127 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 USP38Q8NB14 1042 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 CDHR1Q96JP9 859 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 ZBED2Q9BTP6 218 aa16.71■□□□□ 0.27
MCF2L-210ENST00000409954 EMSYQ7Z589 1322 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 GTPBP6O43824 516 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-210ENST00000409954 TLL1O43897 1013 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 SORBS3O60504 671 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 NBNO60934 754 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 CA3P07451 260 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 ZNF200P98182 395 aaPredicted RBP16.7■□□□□ 0.26
MCF2L-210ENST00000409954 TRIM71Q2Q1W2 868 aaKnown RBP16.7■□□□□ 0.26
MCF2L-210ENST00000409954 TSGA10IPQ3SY00 556 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 ZNF618Q5T7W0 954 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 SERINC5Q86VE9 423 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 GPKOWQ92917 476 aaPredicted RBP eCLIP16.7■□□□□ 0.26
MCF2L-210ENST00000409954 ATP6V0A1Q93050 837 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 NEK1Q96PY6 1258 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 RNPEPQ9H4A4 650 aa16.7■□□□□ 0.26
MCF2L-210ENST00000409954 CUL9Q8IWT3 2517 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 RSPH10B2B2RC85 870 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 CAND2O75155 1236 aa16.69■□□□□ 0.26
MCF2L-210ENST00000409954 PLEKHA8P1O95397 391 aa16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms