RNA–Protein interactions for RNA: ENST00000409909.7

LSM5-204, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-204ENST00000409909 V9GY48 417 aaPredicted RBP20.38■□□□□ 0.85
LSM5-204ENST00000409909 CDH23Q9H251 3354 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 SPATA31C2B4DYI2 1134 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 STAM2O75886 525 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 RPS6KB1P23443 525 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 ICAM3P32942 547 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 RCAN1P53805 252 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 FGD1P98174 961 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 PTPN11Q06124 597 aaPredicted RBP20.37■□□□□ 0.85
LSM5-204ENST00000409909 PCNX4Q63HM2 1172 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 TYW1BQ6NUM6 668 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 ZNF365Q70YC5 407 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 BRF1Q92994 677 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 VWCEQ96DN2 955 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 SPATA33Q96N06 139 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 CTAGE1Q96RT6 745 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 USP26Q9BXU7 913 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 IL23AQ9NPF7 189 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 MTMR10Q9NXD2 777 aa20.37■□□□□ 0.85
LSM5-204ENST00000409909 PPFIA4O75335 1185 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 ZNF286BP0CG31 522 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 ADD1P35611 737 aaKnown RBP20.36■□□□□ 0.85
LSM5-204ENST00000409909 SMAD3P84022 425 aaKnown RBP20.36■□□□□ 0.85
LSM5-204ENST00000409909 RASIP1Q5U651 963 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 FAM109BQ6ICB4 259 aaPredicted RBP20.36■□□□□ 0.85
LSM5-204ENST00000409909 FBXL16Q8N461 479 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 SCLYQ96I15 445 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 NAP1L2Q9ULW6 460 aaPredicted RBP20.36■□□□□ 0.85
LSM5-204ENST00000409909 CHD9Q3L8U1 2897 aa20.36■□□□□ 0.85
LSM5-204ENST00000409909 F2P00734 622 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 PSEN2P49810 448 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 GNPTABQ3T906 1256 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 GDF6Q6KF10 455 aaPredicted RBP20.35■□□□□ 0.85
LSM5-204ENST00000409909 XRRA1Q6P2D8 792 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 SESTD1Q86VW0 696 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 AGXT2Q9BYV1 514 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 MLXIPQ9HAP2 919 aa20.35■□□□□ 0.85
LSM5-204ENST00000409909 HAS3O00219 553 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 EPB41L2O43491 1005 aaKnown RBP20.34■□□□□ 0.85
LSM5-204ENST00000409909 METAP2P50579 478 aaKnown RBP eCLIP20.34■□□□□ 0.85
LSM5-204ENST00000409909 MFSD10Q14728 455 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 PTGISQ16647 500 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 ALG1Q9BT22 464 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 PCDHA6Q9UN73 950 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 TELO2Q9Y4R8 837 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 PCDHA8Q9Y5H6 950 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 DOCK5Q9H7D0 1870 aa20.34■□□□□ 0.85
LSM5-204ENST00000409909 STXBP3O00186 592 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 FIBPO43427 364 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 ITGB5P18084 799 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 PSMA5P28066 241 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 NAPAP54920 295 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 KIAA0753Q2KHM9 967 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 PSRC1Q6PGN9 363 aaPredicted RBP20.33■□□□□ 0.85
LSM5-204ENST00000409909 CYFIP1Q7L576 1253 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 FAM161BQ96MY7 647 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 C16orf70Q9BSU1 422 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 ZSWIM6Q9HCJ5 1215 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 RIC8AQ9NPQ8 531 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 BARHL2Q9NY43 387 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 HDAC6Q9UBN7 1215 aa20.33■□□□□ 0.85
LSM5-204ENST00000409909 A0A0C4DFX4 3053 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 HSFX4A0A1B0GTS1 333 aaPredicted RBP20.32■□□□□ 0.84
LSM5-204ENST00000409909 HSFX3A0A1B0GWH4 333 aaPredicted RBP20.32■□□□□ 0.84
LSM5-204ENST00000409909 FGBP02675 491 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 NEDD9Q14511 834 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 METTL7BQ6UX53 244 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 RUFY3Q7L099 469 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 C7orf31Q8N865 590 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 HERVK_113Q902F9 699 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 KATNAL1Q9BW62 490 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 CXXC1Q9P0U4 656 aaPredicted RBP20.32■□□□□ 0.84
LSM5-204ENST00000409909 GTF2IRD1Q9UHL9 959 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 EYSQ5T1H1 3165 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 SCN5AQ14524 2016 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 NID2Q14112 1375 aa20.32■□□□□ 0.84
LSM5-204ENST00000409909 TRIP12Q14669 1992 aaPredicted RBP20.32■□□□□ 0.84
LSM5-204ENST00000409909 CCDC196A0A1B0GTZ2 297 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 SPDYE3A6NKU9 549 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 GRXCR1A8MXD5 290 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 PITPNM1O00562 1244 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 ATP9AO75110 1047 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 EVCP57679 992 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 HIC1Q14526 733 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 PPP1R18Q6NYC8 613 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 DHX38Q92620 1227 aaKnown RBP20.31■□□□□ 0.84
LSM5-204ENST00000409909 GUCD1Q96NT3 240 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 GPR20Q99678 358 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 SENP7Q9BQF6 1050 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 TTYH1Q9H313 450 aaPredicted RBP20.31■□□□□ 0.84
LSM5-204ENST00000409909 SEMA6BQ9H3T3 888 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 NOD1Q9Y239 953 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 UBIAD1Q9Y5Z9 338 aa20.31■□□□□ 0.84
LSM5-204ENST00000409909 SMCO2A6NFE2 343 aa20.3■□□□□ 0.84
LSM5-204ENST00000409909 CENPBP07199 599 aaPredicted RBP20.3■□□□□ 0.84
LSM5-204ENST00000409909 IQCF3P0C7M6 154 aa20.3■□□□□ 0.84
LSM5-204ENST00000409909 ADCY7P51828 1080 aa20.3■□□□□ 0.84
LSM5-204ENST00000409909 TOB2Q14106 344 aaPredicted RBP20.3■□□□□ 0.84
LSM5-204ENST00000409909 PFKFB3Q16875 520 aaPredicted RBP20.3■□□□□ 0.84
LSM5-204ENST00000409909 ZNF697Q5TEC3 545 aa20.3■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms