RNA–Protein interactions for RNA: ENST00000409739.2

TRAF3IP1-203, Transcript of TRAF3 interacting protein 1, humanhuman

TSL 3

Gene TRAF3IP1, Length 1,070 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1-203ENST00000409739 SYN1P17600 705 aa35.67■■■■□ 3.3
TRAF3IP1-203ENST00000409739 TLE2Q04725 743 aa35.67■■■■□ 3.3
TRAF3IP1-203ENST00000409739 UPF2Q9HAU5 1272 aaKnown RBP35.67■■■■□ 3.3
TRAF3IP1-203ENST00000409739 FIBPO43427 364 aa35.66■■■■□ 3.3
TRAF3IP1-203ENST00000409739 CTDNEP1O95476 244 aa35.66■■■■□ 3.3
TRAF3IP1-203ENST00000409739 MMP3P08254 477 aa35.66■■■■□ 3.3
TRAF3IP1-203ENST00000409739 DHX37Q8IY37 1157 aaKnown RBP35.66■■■■□ 3.3
TRAF3IP1-203ENST00000409739 AIFM3Q96NN9 605 aa35.66■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SPATA31C2B4DYI2 1134 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 PQBP1O60828 265 aaKnown RBP35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 GGPS1O95749 300 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 GNA11P29992 359 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 LAMC2Q13753 1193 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 CELF3Q5SZQ8 465 aaKnown RBP35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 JAKMIP3Q5VZ66 844 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 ANKRD33Q7Z3H0 272 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 REXO1Q8N1G1 1221 aaKnown RBP35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 PCDH10Q9P2E7 1040 aa35.65■■■■□ 3.3
TRAF3IP1-203ENST00000409739 ARVCFO00192 962 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SORBS3O60504 671 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 DTNBO60941 627 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 SREBF1P36956 1147 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 CDK7P50613 346 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 PSMC6P62333 389 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 MYSM1Q5VVJ2 828 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 UBIAD1Q9Y5Z9 338 aa35.64■■■■□ 3.3
TRAF3IP1-203ENST00000409739 GRIN2DO15399 1336 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 ITGB5P18084 799 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 NLRX1Q86UT6 975 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 PPTC7Q8NI37 304 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 GPRASP2Q96D09 838 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MTG1Q9BT17 334 aaPredicted RBP35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 PDLIM7Q9NR12 457 aa35.63■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MROH7Q68CQ1 1323 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 KPNA6O60684 536 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 ITGA7Q13683 1181 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 SLC43A3Q8NBI5 491 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 BICD2Q8TD16 824 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 TOX2Q96NM4 488 aa35.62■■■■□ 3.29
TRAF3IP1-203ENST00000409739 ST3GAL1Q11201 340 aa35.61■■■■□ 3.29
TRAF3IP1-203ENST00000409739 RASGRP4Q8TDF6 673 aa35.61■■■■□ 3.29
TRAF3IP1-203ENST00000409739 BCAS3Q9H6U6 928 aa35.61■■■■□ 3.29
TRAF3IP1-203ENST00000409739 LIMCH1Q9UPQ0 1083 aa35.61■■■■□ 3.29
TRAF3IP1-203ENST00000409739 CLTBP09497 229 aa35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 NLRP5P59047 1200 aa35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MCTP2Q6DN12 878 aa35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 SPATA33Q96N06 139 aa35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 JADE2Q9NQC1 790 aa35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 PRDM5Q9NQX1 630 aaPredicted RBP35.6■■■■□ 3.29
TRAF3IP1-203ENST00000409739 ARHGAP4P98171 946 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 NEDD9Q14511 834 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 RABEP1Q15276 862 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 DGKDQ16760 1214 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 HSDL1Q3SXM5 330 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 SH3RF1Q7Z6J0 888 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 FAM126BQ8IXS8 530 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 FAM177A1Q8N128 213 aaPredicted RBP35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 CRYGNQ8WXF5 182 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 CDHR1Q96JP9 859 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 TBC1D32Q96NH3 1257 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MLXIPQ9HAP2 919 aa35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 ORC3Q9UBD5 711 aaPredicted RBP35.59■■■■□ 3.29
TRAF3IP1-203ENST00000409739 RANBP2P49792 3224 aaKnown RBP35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 DCDC2CA8MYV0 355 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 HOXD8P13378 290 aaPredicted RBP35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 FAAP100Q0VG06 881 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MTMR1Q13613 665 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 METTL7BQ6UX53 244 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 NSUN7Q8NE18 718 aaKnown RBP35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 SENP7Q9BQF6 1050 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 MXRA8Q9BRK3 442 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 PRKAG2Q9UGJ0 569 aa35.58■■■■□ 3.29
TRAF3IP1-203ENST00000409739 CHRDL2Q6WN34 429 aa35.57■■■■□ 3.28
TRAF3IP1-203ENST00000409739 CYFIP1Q7L576 1253 aa35.57■■■■□ 3.28
TRAF3IP1-203ENST00000409739 CYP2W1Q8TAV3 490 aa35.57■■■■□ 3.28
TRAF3IP1-203ENST00000409739 SEZ6LQ9BYH1 1024 aa35.57■■■■□ 3.28
TRAF3IP1-203ENST00000409739 PCDHA4Q9UN74 947 aa35.57■■■■□ 3.28
TRAF3IP1-203ENST00000409739 KCNA2P16389 499 aa35.56■■■■□ 3.28
TRAF3IP1-203ENST00000409739 NPY5RQ15761 445 aa35.56■■■■□ 3.28
TRAF3IP1-203ENST00000409739 TRIM43BA6NCK2 446 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 ATP9AO75110 1047 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 FDPSP14324 419 aaKnown RBP35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 MAGEA10P43363 369 aaPredicted RBP35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 CEP55Q53EZ4 464 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 DAGLBQ8NCG7 672 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 KAT2BQ92831 832 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 TRIM43Q96BQ3 446 aaPredicted RBP35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 BACH2Q9BYV9 841 aa35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 TRIP12Q14669 1992 aaPredicted RBP35.55■■■■□ 3.28
TRAF3IP1-203ENST00000409739 CYP3A4P08684 503 aa35.54■■■■□ 3.28
TRAF3IP1-203ENST00000409739 ZNF286BP0CG31 522 aa35.54■■■■□ 3.28
TRAF3IP1-203ENST00000409739 NBPF20Q3BBV1 942 aa35.54■■■■□ 3.28
TRAF3IP1-203ENST00000409739 PRO3102Q9H379 93 aa35.54■■■■□ 3.28
TRAF3IP1-203ENST00000409739 COLQQ9Y215 455 aaPredicted RBP35.54■■■■□ 3.28
TRAF3IP1-203ENST00000409739 TRIOBPQ9H2D6 2365 aa35.53■■■■□ 3.28
TRAF3IP1-203ENST00000409739 M0R2N6 131 aa35.53■■■■□ 3.28
TRAF3IP1-203ENST00000409739 MAFGO15525 162 aa35.53■■■■□ 3.28
TRAF3IP1-203ENST00000409739 JAK2O60674 1132 aa35.53■■■■□ 3.28
TRAF3IP1-203ENST00000409739 CD4P01730 458 aa35.53■■■■□ 3.28
TRAF3IP1-203ENST00000409739 GALNT17Q6IS24 598 aa35.53■■■■□ 3.28
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms