RNA–Protein interactions for RNA: ENST00000409458.3

GPNMB-203, Transcript of glycoprotein nmb, humanhuman

TSL 1 (best) BASIC

Gene GPNMB, Length 1,673 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-203ENST00000409458 GSDMAQ96QA5 445 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 RMDN3Q96TC7 470 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 CYP39A1Q9NYL5 469 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 STK17AQ9UEE5 414 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 KDM3AQ9Y4C1 1321 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 CCT6AP40227 531 aaKnown RBP15.79■□□□□ 0.12
GPNMB-203ENST00000409458 LRCH2Q5VUJ6 765 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 ARHGEF16Q5VV41 709 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 TRPM7Q96QT4 1865 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 PPP1R9BQ96SB3 815 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 PDCD2LQ9BRP1 358 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 PAGR1Q9BTK6 254 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 UBIAD1Q9Y5Z9 338 aa15.79■□□□□ 0.12
GPNMB-203ENST00000409458 POTEB3A0JP26 581 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 BECN2A8MW95 431 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 MED24O75448 989 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 PSMD10O75832 226 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 RPN1P04843 607 aaKnown RBP15.78■□□□□ 0.12
GPNMB-203ENST00000409458 OSBPP22059 807 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 MKRN3Q13064 507 aaKnown RBP15.78■□□□□ 0.12
GPNMB-203ENST00000409458 PABPC4Q13310 644 aaKnown RBP eCLIP15.78■□□□□ 0.12
GPNMB-203ENST00000409458 HAUS3Q68CZ6 603 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 POTEBQ6S5H4 581 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 RIOX2Q8IUF8 465 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 C2orf69Q8N8R5 385 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 CHST13Q8NET6 341 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 LARP4BQ92615 738 aaKnown RBP15.78■□□□□ 0.12
GPNMB-203ENST00000409458 RAD54LQ92698 747 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 PDLIM2Q96JY6 352 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 ZNF577Q9BSK1 485 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 WDR11Q9BZH6 1224 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 SPATC1LQ9H0A9 340 aa15.78■□□□□ 0.12
GPNMB-203ENST00000409458 GOLGA6L19H0YKK7 550 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 SLC26A4O43511 780 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 MYL1P05976 194 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 BCRP11274 1271 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 MCM6Q14566 821 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 NIPA1Q7RTP0 329 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 MLKLQ8NB16 471 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 TXNRD2Q9NNW7 524 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 JADE2Q9NQC1 790 aa15.77■□□□□ 0.12
GPNMB-203ENST00000409458 DCAF8L1A6NGE4 600 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 EML1O00423 815 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 KLRC4O43908 158 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 ADCY5O95622 1261 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 ITGBL1O95965 494 aaPredicted RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MYCLP12524 364 aaPredicted RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 PLCB2Q00722 1185 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 PPP2R5CQ13362 524 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 DHX8Q14562 1220 aaKnown RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 NCAPHQ15003 741 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 CST9Q5W186 159 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 OTOP1Q7RTM1 612 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 SMYD4Q8IYR2 804 aaPredicted RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 ERMNQ8TAM6 284 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MS4A4AQ96JQ5 239 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 C7orf25Q9BPX7 421 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MOV10L1Q9BXT6 1211 aaKnown RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 TRIM9Q9C026 710 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MAF1Q9H063 256 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 NT5C3AQ9H0P0 336 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 KCNH7Q9NS40 1196 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 KIAA1024Q9UPX6 916 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 POTEFA5A3E0 1075 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 IPO5O00410 1097 aaKnown RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 CHMP2AO43633 222 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 GAS7O60861 476 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MTMR1Q13613 665 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 CHADLQ6NUI6 762 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 POTEGQ6S5H5 508 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 SV2BQ7L1I2 683 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 NCAPG2Q86XI2 1143 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 CATSPER3Q86XQ3 398 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 TEKT3Q9BXF9 490 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 AGO4Q9HCK5 861 aaKnown RBP15.76■□□□□ 0.11
GPNMB-203ENST00000409458 RMND1Q9NWS8 449 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 PKD2L1Q9P0L9 805 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 RBPJLQ9UBG7 517 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 DACH1Q9UI36 760 aa15.76■□□□□ 0.11
GPNMB-203ENST00000409458 MYMKA6NI61 221 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 E9PMD0 336 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 IKBKBO14920 756 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 SPATA31C1P0DKV0 1188 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 CETPP11597 493 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 CD44P16070 742 aaKnown RBP15.75■□□□□ 0.11
GPNMB-203ENST00000409458 RPA1P27694 616 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 CCND2P30279 289 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 GTF2A2P52657 109 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 KMT5BQ4FZB7 885 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 B3GNT9Q6UX72 402 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 NSUN6Q8TEA1 469 aaKnown RBP15.75■□□□□ 0.11
GPNMB-203ENST00000409458 EIF2AK1Q9BQI3 630 aaKnown RBP15.75■□□□□ 0.11
GPNMB-203ENST00000409458 UNC45AQ9H3U1 944 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 R3HDMLQ9H3Y0 253 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 FBXO40Q9UH90 709 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 STK24Q9Y6E0 443 aa15.75■□□□□ 0.11
GPNMB-203ENST00000409458 LRRC37A2A6NM11 1700 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 CCL15-CCL14A0A0B4J2E2 113 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 SMTNL1A8MU46 457 aa15.74■□□□□ 0.11
GPNMB-203ENST00000409458 NR3C2P08235 984 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms