RNA–Protein interactions for RNA: ENST00000409435.5

SCN9A-202, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 5,967 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-202ENST00000409435 KIF1AQ12756 1690 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 BICDL2A1A5D9 508 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 ERCC3P19447 782 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 ZBTB16Q05516 673 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SFSWAPQ12872 951 aaKnown RBP8.01□□□□□ -1.13
SCN9A-202ENST00000409435 RASGRF1Q13972 1273 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 MAP7D1Q3KQU3 841 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SCFD2Q8WU76 684 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 PLIN2Q99541 437 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 VPS18Q9P253 973 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 DDX25Q9UHL0 483 aaKnown RBP8.01□□□□□ -1.13
SCN9A-202ENST00000409435 FAF1Q9UNN5 650 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-202ENST00000409435 FARP1Q9Y4F1 1045 aaPredicted RBP8.01□□□□□ -1.13
SCN9A-202ENST00000409435 KDM3AQ9Y4C1 1321 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 ATRNO75882 1429 aa8.01□□□□□ -1.13
SCN9A-202ENST00000409435 SKIP12755 728 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ARHGAP25P42331 645 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 APOBRQ0VD83 1088 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 PTPAQ15257 358 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 CPLX4Q7Z7G2 160 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 SUGP1Q8IWZ8 645 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 AKT1S1Q96B36 256 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ZNF302Q9NR11 478 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 TLL1O43897 1013 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ARL1P40616 181 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 DDR1Q08345 913 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ZNF174Q15697 407 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 MAK16Q9BXY0 300 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 NT5C3AQ9H0P0 336 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 C11orf49Q9H6J7 331 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 LRRC4BQ9NT99 713 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 IPO11Q9UI26 975 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 A6NNZ2 444 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ZMYND10O75800 440 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ZBTB48P10074 688 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 RECQLP46063 649 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 JAK3P52333 1124 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 BTG3Q14201 252 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 TUBB8Q3ZCM7 444 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 TMC7Q7Z402 723 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 EHBP1Q8NDI1 1231 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 FAM161BQ96MY7 647 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 SPAG5Q96R06 1193 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 MTG1Q9BT17 334 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 TMX1Q9H3N1 280 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 MTMR1Q13613 665 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 ADAT2Q7Z6V5 191 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 JAKMIP2Q96AA8 810 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 FAM84BQ96KN1 310 aaPredicted RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 EMILIN2Q9BXX0 1053 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 DOLKQ9UPQ8 538 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 MYO1EQ12965 1108 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 RAB30Q15771 203 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 PAN2Q504Q3 1202 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 CCDC183Q5T5S1 534 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 PPP1R9BQ96SB3 815 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 RPF1Q9H9Y2 349 aaKnown RBP8□□□□□ -1.13
SCN9A-202ENST00000409435 ANO10Q9NW15 660 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 DACT1Q9NYF0 836 aa8□□□□□ -1.13
SCN9A-202ENST00000409435 MED23Q9ULK4 1368 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 CARNS1A5YM72 827 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 hCG_1984214I3L0E3 225 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 CETN3O15182 167 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 MCAMP43121 646 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 KIF11P52732 1056 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 LAMC2Q13753 1193 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 ZNF713Q8N859 430 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 PRMT6Q96LA8 375 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 MRPL44Q9H9J2 332 aaKnown RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 TNKSO95271 1327 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 GPR25O00155 361 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 LUC7L3O95232 432 aaKnown RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 POLR2BP30876 1174 aaKnown RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 CIITAP33076 1130 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 NT5C2P49902 561 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 SLC7A5P2Q9GIP4 190 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 TRMT1Q9NXH9 659 aaKnown RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 MOSPD1Q9UJG1 213 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 LRRIQ1Q96JM4 1722 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 TRPM1Q7Z4N2 1603 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 NKRFO15226 690 aaKnown RBP eCLIP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 DNAJC8O75937 253 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 GCNT3O95395 438 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 PRKAR2AP13861 404 aaKnown RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 KIF5AQ12840 1032 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 CYP4A22Q5TCH4 519 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 POLLQ9UGP5 575 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 RRN3P2A6NIE6 340 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 SPDYE16A6NNV3 312 aaPredicted RBP7.99□□□□□ -1.13
SCN9A-202ENST00000409435 F5H6K3 240 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 FGBP02675 491 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 TUBBP07437 444 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 CYP2C8P10632 490 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 AFMP43652 599 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 KLRC3Q07444 240 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 UVSSAQ2YD98 709 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 SPDYE2Q495Y8 402 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 ZNF654Q8IZM8 581 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 FAM76AQ8TAV0 307 aa7.99□□□□□ -1.13
SCN9A-202ENST00000409435 STAMQ92783 540 aa7.99□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms