RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 GRB10Q13322 594 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 IKBKEQ14164 716 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 PTPROQ16827 1216 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 PUS10Q3MIT2 529 aaKnown RBP9.07□□□□□ -0.96
LSM5-202ENST00000409292 GPATCH4Q5T3I0 446 aaKnown RBP9.07□□□□□ -0.96
LSM5-202ENST00000409292 CNKSR3Q6P9H4 555 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 LRRC8DQ7L1W4 858 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 RGS22Q8NE09 1264 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 TGS1Q96RS0 853 aaKnown RBP9.07□□□□□ -0.96
LSM5-202ENST00000409292 ANAPC4Q9UJX5 808 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 DDX52Q9Y2R4 599 aaKnown RBP eCLIP9.07□□□□□ -0.96
LSM5-202ENST00000409292 DNAH12Q6ZR08 3092 aa9.07□□□□□ -0.96
LSM5-202ENST00000409292 PRRC2BQ5JSZ5 2229 aaKnown RBP9.07□□□□□ -0.96
LSM5-202ENST00000409292 FRMPD2Q68DX3 1309 aaPredicted RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 TCF20Q9UGU0 1960 aaKnown RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 RCCD1A6NED2 376 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 DHX16O60231 1041 aaKnown RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 ALADP13716 330 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 MX1P20591 662 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 SSTR3P32745 418 aaPredicted RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 RPS6P62753 249 aaKnown RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 TRAF1Q13077 416 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 STXBP2Q15833 593 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 DGKDQ16760 1214 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 TSHZ3Q63HK5 1081 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 SLC30A10Q6XR72 485 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 MFSD6Q6ZSS7 791 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 TICAM2Q86XR7 235 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 NSUN6Q8TEA1 469 aaKnown RBP9.06□□□□□ -0.96
LSM5-202ENST00000409292 EVI5LQ96CN4 794 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 IWS1Q96ST2 819 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 RAD9AQ99638 391 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 TMEM47Q9BQJ4 181 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 LRFN3Q9BTN0 628 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 HELLSQ9NRZ9 838 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 TCP11L1Q9NUJ3 509 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 RAPGEFL1Q9UHV5 662 aa9.06□□□□□ -0.96
LSM5-202ENST00000409292 ABCB11O95342 1321 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 EMSYQ7Z589 1322 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 GBF1Q92538 1859 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 NMT2O60551 498 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 GPR37L1O60883 481 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 AMHP03971 560 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 WDR5P61964 334 aaKnown RBP9.05□□□□□ -0.96
LSM5-202ENST00000409292 LAMC2Q13753 1193 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 ALX1Q15699 326 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 USH1GQ495M9 461 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 ARHGEF16Q5VV41 709 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 TTBK2Q6IQ55 1244 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 KCNV1Q6PIU1 500 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 SEPT14Q6ZU15 432 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 CHST3Q7LGC8 479 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 SESTD1Q86VW0 696 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 IQCA1Q86XH1 822 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 DHX37Q8IY37 1157 aaKnown RBP9.05□□□□□ -0.96
LSM5-202ENST00000409292 ESR2Q92731 530 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 SAMD11Q96NU1 681 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 SEC62Q99442 399 aaKnown RBP9.05□□□□□ -0.96
LSM5-202ENST00000409292 EPHX3Q9H6B9 360 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 IL17RBQ9NRM6 502 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 INSL6Q9Y581 213 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 LRRC37A2A6NM11 1700 aa9.05□□□□□ -0.96
LSM5-202ENST00000409292 GJB5O95377 273 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 MMP3P08254 477 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 PDHBP11177 359 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 PTGS1P23219 599 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 EDNRBP24530 442 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 ZNF543Q08ER8 600 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 PTK7Q13308 1070 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 KMT5BQ4FZB7 885 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 MCMDC2Q4G0Z9 681 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 TIGD5Q53EQ6 642 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 TMEM63BQ5T3F8 832 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 GJD3Q8N144 294 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 AFG1LQ8WV93 481 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 CLEC4DQ8WXI8 215 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 PURBQ96QR8 312 aaKnown RBP9.04□□□□□ -0.96
LSM5-202ENST00000409292 UIMC1Q96RL1 719 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 RMDN3Q96TC7 470 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 UBE2ZQ9H832 354 aaPredicted RBP9.04□□□□□ -0.96
LSM5-202ENST00000409292 KAT14Q9H8E8 782 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 MTUS1Q9ULD2 1270 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 MRPL11Q9Y3B7 192 aaKnown RBP9.04□□□□□ -0.96
LSM5-202ENST00000409292 PCDHB3Q9Y5E6 796 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 MRVI1Q9Y6F6 885 aa9.04□□□□□ -0.96
LSM5-202ENST00000409292 DDX49Q9Y6V7 483 aaKnown RBP9.04□□□□□ -0.96
LSM5-202ENST00000409292 NCK2O43639 380 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 EIF3JO75822 258 aaKnown RBP9.03□□□□□ -0.96
LSM5-202ENST00000409292 GGCXP38435 758 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 NOVP48745 357 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 ERVK-21P61565 698 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 DIEXFQ68CQ4 756 aaKnown RBP9.03□□□□□ -0.96
LSM5-202ENST00000409292 DGKHQ86XP1 1220 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 PI4K2BQ8TCG2 481 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 GDPD5Q8WTR4 605 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 ZNF516Q92618 1163 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 COPS5Q92905 334 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 ALG1Q9BT22 464 aa9.03□□□□□ -0.96
LSM5-202ENST00000409292 UPF3BQ9BZI7 483 aaKnown RBP9.03□□□□□ -0.96
LSM5-202ENST00000409292 GTF2IRD1Q9UHL9 959 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms