RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 hCG_1642624A0A1W2PR95 340 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 FIBPO43427 364 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 PPFIA4O75335 1185 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 PSMA5P28066 241 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 RASIP1Q5U651 963 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 HEATR3Q7Z4Q2 680 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 WNT8AQ9H1J5 351 aa17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 FAM217BQ9NTX9 383 aaPredicted RBP17.1■□□□□ 0.33
SMIM11A-203ENST00000399299 CCDC196A0A1B0GTZ2 297 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 SPATA31C2B4DYI2 1134 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 HAS3O00219 553 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 PITPNM1O00562 1244 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 CENPBP07199 599 aaPredicted RBP17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 CYP2C9P11712 490 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 CPA1P15085 419 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 CDC27P30260 824 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 NEDD9Q14511 834 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 HSDL1Q3SXM5 330 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 WWC2Q6AWC2 1192 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 Q6ZUG5 572 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 Q7L0L9 218 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 GPKOWQ92917 476 aaPredicted RBP eCLIP17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 BRF1Q92994 677 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 ZFP91Q96JP5 570 aaPredicted RBP17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 SPATA33Q96N06 139 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 MTMR10Q9NXD2 777 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 DOCK5Q9H7D0 1870 aa17.09■□□□□ 0.33
SMIM11A-203ENST00000399299 SPDYE3A6NKU9 549 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 PSEN2P49810 448 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 METAP2P50579 478 aaKnown RBP eCLIP17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 CCL23P55773 120 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 APOBRQ0VD83 1088 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 SEMA3FQ13275 785 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 METTL7BQ6UX53 244 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 ZNF365Q70YC5 407 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 RPUSD2Q8IZ73 545 aaKnown RBP17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 SENP7Q9BQF6 1050 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 MLXIPQ9HAP2 919 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 GTF2IRD1Q9UHL9 959 aa17.08■□□□□ 0.32
SMIM11A-203ENST00000399299 COL6A3P12111 3177 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 TMEM265A0A087WTH1 108 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 HSFX4A0A1B0GTS1 333 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 HSFX3A0A1B0GWH4 333 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 PFKMP08237 780 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 ZNF286BP0CG31 522 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 ACRP10323 421 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 NAPAP54920 295 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 BFSP2Q13515 415 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 MFSD10Q14728 455 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 PTGISQ16647 500 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 UBE2SQ16763 222 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 ZNF697Q5TEC3 545 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 NLRX1Q86UT6 975 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 HERVK_113Q902F9 699 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 GPRASP2Q96D09 838 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 CDHR1Q96JP9 859 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 USP26Q9BXU7 913 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 GLT8D2Q9H1C3 349 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 MTIF3Q9H2K0 278 aaKnown RBP17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 EHMT1Q9H9B1 1298 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 RIC8AQ9NPQ8 531 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 BARHL2Q9NY43 387 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 RTEL1Q9NZ71 1219 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 NOD1Q9Y239 953 aa17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 V9GY48 417 aaPredicted RBP17.07■□□□□ 0.32
SMIM11A-203ENST00000399299 SCN5AQ14524 2016 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 STXBP3O00186 592 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 FGBP02675 491 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 RFC2P35250 354 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 ADD1P35611 737 aaKnown RBP17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 EVCP57679 992 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 CHMP4BP1P59074 171 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 KIAA0753Q2KHM9 967 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 GDF6Q6KF10 455 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 TYW1BQ6NUM6 668 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 CCDC155Q8N6L0 562 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 C7orf31Q8N865 590 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 GIMAP8Q8ND71 665 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 CAGE1Q8TC20 777 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 PPP1R13LQ8WUF5 828 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 CTAGE1Q96RT6 745 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 ZSWIM6Q9HCJ5 1215 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 NAP1L2Q9ULW6 460 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 PCDHA6Q9UN73 950 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 PCDHA8Q9Y5H6 950 aa17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 TRIP12Q14669 1992 aaPredicted RBP17.06■□□□□ 0.32
SMIM11A-203ENST00000399299 NOP56O00567 594 aaKnown RBP17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 SORBS3O60504 671 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 FOSP01100 380 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 RBL2Q08999 1139 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 PFKFB3Q16875 520 aaPredicted RBP17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 RUFY3Q7L099 469 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 CYFIP1Q7L576 1253 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 VWCEQ96DN2 955 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 SCLYQ96I15 445 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 C16orf70Q9BSU1 422 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 TM6SF1Q9BZW5 370 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 HDAC6Q9UBN7 1215 aa17.05■□□□□ 0.32
SMIM11A-203ENST00000399299 UBIAD1Q9Y5Z9 338 aa17.05■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms