RNA–Protein interactions for RNA: ENST00000399079.7

HLA-DQB1-202, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,501 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-202ENST00000399079 ITGB8P26012 769 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CLK2P49760 499 aaKnown RBP16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SSRP1Q08945 709 aaKnown RBP16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 HSDL1Q3SXM5 330 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 GNPTABQ3T906 1256 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 CELF3Q5SZQ8 465 aaKnown RBP16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 KCNV1Q6PIU1 500 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 SLC43A3Q8NBI5 491 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 EMID1Q96A84 441 aaPredicted RBP16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 TOX2Q96NM4 488 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 ZMYND12Q9H0C1 365 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 PRO3102Q9H379 93 aa16.14■□□□□ 0.18
HLA-DQB1-202ENST00000399079 LAMA2P24043 3122 aaKnown RBP16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SPATA31C2B4DYI2 1134 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 PFKFB2O60825 505 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ITGB5P18084 799 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ICAM3P32942 547 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CHMP4BP1P59074 171 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 LAMC2Q13753 1193 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ANKRD1Q15327 319 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ME3Q16798 604 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 JAKMIP3Q5VZ66 844 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 XRRA1Q6P2D8 792 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 FAM126BQ8IXS8 530 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TRIM22Q8IYM9 498 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 AIFM3Q96NN9 605 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KIF2CQ99661 725 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MTG1Q9BT17 334 aaPredicted RBP16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ANO3Q9BYT9 981 aa16.14■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MROH7Q68CQ1 1323 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ESYT2A0FGR8 921 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 FIBPO43427 364 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CACNB1Q02641 598 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 HABP4Q5JVS0 413 aaKnown RBP16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CYFIP1Q7L576 1253 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NECAB1Q8N987 351 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 PPTC7Q8NI37 304 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 RASGRP4Q8TDF6 673 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CCDC12Q8WUD4 166 aaPredicted RBP16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SPATA33Q96N06 139 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 C22orf23Q9BZE7 217 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MLXIPQ9HAP2 919 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 C6orf50Q9HD87 102 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TMEM39AQ9NV64 488 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TELO2Q9Y4R8 837 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GTF3C3Q9Y5Q9 886 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TRIOBPQ9H2D6 2365 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SZT2Q5T011 3432 aa16.13■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ATP9AO75110 1047 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CTDNEP1O95476 244 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 FOSP01100 380 aaPredicted RBP16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 DGKDQ16760 1214 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NBPF20Q3BBV1 942 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CPLX2Q6PUV4 134 aaKnown RBP16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CYP2W1Q8TAV3 490 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KAT2BQ92831 832 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 BADQ92934 168 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GLT8D2Q9H1C3 349 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TRPV6Q9H1D0 765 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 UBIAD1Q9Y5Z9 338 aa16.12■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MYH7BA7E2Y1 1941 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 B4GALT4O60513 344 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KPNA6O60684 536 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 DEXIO95424 95 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CD4P01730 458 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ZNF286BP0CG31 522 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 AP3B2Q13367 1082 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 FAM47CQ5HY64 1035 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NLRX1Q86UT6 975 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 REXO1Q8N1G1 1221 aaKnown RBP16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 LBHD1Q9BQE6 289 aaPredicted RBP16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 EHMT1Q9H9B1 1298 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 PKD2L1Q9P0L9 805 aa16.11■□□□□ 0.17
HLA-DQB1-202ENST00000399079 KIAA0355O15063 1070 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GNA11P29992 359 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SREBF1P36956 1147 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SP4Q02446 784 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MTMR1Q13613 665 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NEDD9Q14511 834 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TEX2Q8IWB9 1127 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CCDC148Q8NFR7 591 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GPRASP2Q96D09 838 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 UBE2OQ9C0C9 1292 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TRMT13Q9NUP7 481 aaKnown RBP16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TBX21Q9UL17 535 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SCN10AQ9Y5Y9 1956 aa16.1■□□□□ 0.17
HLA-DQB1-202ENST00000399079 TLR3O15455 904 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 PPFIA4O75335 1185 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CDKL5O76039 1030 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 RAG1P15918 1043 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 BMP8BP34820 402 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 RBM25P49756 843 aaKnown RBP16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 NLRP5P59047 1200 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 ARHGAP4P98171 946 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 METTL7BQ6UX53 244 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 CRYGNQ8WXF5 182 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 GTF3C6Q969F1 213 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 SENP7Q9BQF6 1050 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 MXRA8Q9BRK3 442 aa16.09■□□□□ 0.17
HLA-DQB1-202ENST00000399079 JADE2Q9NQC1 790 aa16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms