RNA–Protein interactions for RNA: ENST00000399022.8

RPRD1A-202, Transcript of regulation of nuclear pre-mRNA domain containing 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPRD1A, Length 4,438 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPRD1A-202ENST00000399022 ELAC2Q9BQ52 826 aaKnown RBP15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 BRIP1Q9BX63 1249 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 ASIC3Q9UHC3 531 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 LEMD3Q9Y2U8 911 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 PCDHA13Q9Y5I0 950 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 WDR19Q8NEZ3 1342 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 POTEJP0CG39 1038 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 ZNF658Q5TYW1 1059 aaPredicted RBP15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 NFRKBQ6P4R8 1299 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 CLEC4GQ6UXB4 293 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 VPS52Q8N1B4 723 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 RETREG2Q8NC44 543 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 IQCGQ9H095 443 aaKnown RBP15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 IFT172Q9UG01 1749 aa15.96■□□□□ 0.15
RPRD1A-202ENST00000399022 ANO9A1A5B4 782 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 KIF11P52732 1056 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 LRRC41Q15345 812 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 CCDC174Q6PII3 467 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 MLXIPQ9HAP2 919 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 COL15A1P39059 1388 aa15.96■□□□□ 0.14
RPRD1A-202ENST00000399022 SPOPO43791 374 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 KRT14P02533 472 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 SERPINB2P05120 415 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 CUL4BQ13620 913 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 HAUS3Q68CZ6 603 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 CEP63Q96MT8 703 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 NUCKS1Q9H1E3 243 aaKnown RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 TARSL2A2RTX5 802 aaKnown RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 PRR16Q569H4 304 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 CPXCR1Q8N123 301 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ZNF473Q8WTR7 871 aaKnown RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ANKZF1Q9H8Y5 726 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 HAUS2Q9NVX0 235 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ENO4A6NNW6 628 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 RPL13P26373 211 aaKnown RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 TRAF1Q13077 416 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 KCTD1Q719H9 257 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 MSANTD4Q8NCY6 345 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 SPATA4Q8NEY3 305 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 PPP1R14CQ8TAE6 165 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 RAB3IPQ96QF0 476 aaPredicted RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 DNM3Q9UQ16 869 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ZBTB12Q9Y330 459 aaPredicted RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 A0A1B0GTH6 734 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 CACNB1Q02641 598 aaPredicted RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 GNPTABQ3T906 1256 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 CAPRIN2Q6IMN6 1127 aaKnown RBP15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 AMFRQ9UKV5 643 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 STK36Q9NRP7 1315 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ABCC12Q96J65 1359 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 PLEKHG2Q9H7P9 1386 aa15.95■□□□□ 0.14
RPRD1A-202ENST00000399022 ABCB4P21439 1286 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 SLCO1A2P46721 670 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 CYP4A11Q02928 519 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 GPBP1Q86WP2 473 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 ZNF34Q8IZ26 560 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 TSC22D3Q99576 134 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 TRIM49BA6NDI0 452 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 TNFAIP3P21580 790 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 SATB1Q01826 763 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 NR1I3Q14994 352 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 PCDHB13Q9Y5F0 798 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 NCK2O43639 380 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 TFRCP02786 760 aaKnown RBP15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 LSP1P33241 339 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 CASP7P55210 303 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 MYOCDQ8IZQ8 938 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 RDH13Q8NBN7 331 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 SMCR8Q8TEV9 937 aaPredicted RBP15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 DONSONQ9NYP3 566 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 RNF14Q9UBS8 474 aa15.94■□□□□ 0.14
RPRD1A-202ENST00000399022 PP2D1A8MPX8 630 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 PLCB3Q01970 1234 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 SYCE1Q8N0S2 351 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 DDX12PQ92771 950 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 EPN3Q9H201 632 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 GCNT3O95395 438 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 PLCG1P19174 1290 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 GRIN1Q05586 938 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 U2AF1L4Q8WU68 220 aaKnown RBP15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 ATP6V1G3Q96LB4 118 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 PCDHA1Q9Y5I3 950 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 EPB41P11171 864 aaKnown RBP15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 RASSF2P50749 326 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 NCAPHQ15003 741 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 OSBPL9Q96SU4 736 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 AP1M1Q9BXS5 423 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 CTTNBP2NLQ9P2B4 639 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 DDX25Q9UHL0 483 aaKnown RBP15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 MROH7-TTC4A0A0A0MT08 1334 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 CDK8P49336 464 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 PLTPP55058 493 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 GALNT17Q6IS24 598 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 KRT26Q7Z3Y9 468 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 SPICE1Q8N0Z3 855 aa15.93■□□□□ 0.14
RPRD1A-202ENST00000399022 ATP2A1O14983 1001 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 MAGOHP61326 146 aaKnown RBP15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 ADCY1Q08828 1119 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 EP400NLQ6ZTU2 488 aa15.92■□□□□ 0.14
RPRD1A-202ENST00000399022 TPH2Q8IWU9 490 aa15.92■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms