RNA–Protein interactions for RNA: ENST00000398640.6

PCDHA11-201, Transcript of protocadherin alpha 11, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PCDHA11, Length 6,115 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHA11-201ENST00000398640 ZNF827Q17R98 1081 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 CCDC84Q86UT8 332 aaPredicted RBP15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 NOSTRINQ8IVI9 506 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 PPM1KQ8N3J5 372 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 CHAMP1Q96JM3 812 aa15.56■□□□□ 0.08
PCDHA11-201ENST00000398640 EPHA10Q5JZY3 1008 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 DCAF4Q8WV16 495 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 RPAP1Q9BWH6 1393 aaPredicted RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 PTPN21Q16825 1174 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 DENND2CQ68D51 928 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 PI4K2BQ8TCG2 481 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 C3P01024 1663 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 ARHGAP23Q9P227 1491 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 KCNK3O14649 394 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 OR52Z1P0C646 297 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 PDE6CP51160 858 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 JPH2Q9BR39 696 aaPredicted RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 KIF11P52732 1056 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 SNAPC2Q13487 334 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 PUS7LQ9H0K6 701 aaKnown RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 TNPO2O14787 897 aaKnown RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 SPP2Q13103 211 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 NXNQ6DKJ4 435 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 ZNF274Q96GC6 653 aaPredicted RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 MMP19Q99542 508 aa15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 XPO4Q9C0E2 1151 aaKnown RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 ZBTB12Q9Y330 459 aaPredicted RBP15.55■□□□□ 0.08
PCDHA11-201ENST00000398640 TNS2Q63HR2 1409 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 MYSM1Q5VVJ2 828 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 EEF2KMTQ96G04 330 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 TPCN1Q9ULQ1 816 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 H0YCG3 227 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 POLR2FP61218 127 aaKnown RBP15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 TUBB2AQ13885 445 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 DESI2Q9BSY9 194 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 TUBB2BQ9BVA1 445 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 ADCY8P40145 1251 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 PAK2Q13177 524 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 FAM83BQ5T0W9 1011 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 SCYL1Q96KG9 808 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 SNX25Q9H3E2 840 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 ZBBXA8MT70 800 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 SNAP23O00161 211 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 HNRNPDLO14979 420 aaKnown RBP15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 NTSR2O95665 410 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 NUF2Q9BZD4 464 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 SLITRK6Q9H5Y7 841 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 IMPACTQ9P2X3 320 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 CYP2D7A0A087X1C5 515 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 COPB2P35606 906 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 RPS6KA2Q15349 733 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 MYOZ2Q9NPC6 264 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 CLIC4Q9Y696 253 aa15.54■□□□□ 0.08
PCDHA11-201ENST00000398640 KIF1AQ12756 1690 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 KIAA1210Q9ULL0 1709 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 BNIP3LO60238 219 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 CDC37Q16543 378 aaPredicted RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 HADHQ16836 314 aaKnown RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 INTS5Q6P9B9 1019 aaKnown RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 RNF207Q6ZRF8 634 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ATP6V0A1Q93050 837 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 PPP1R12CQ9BZL4 782 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 PCK1P35558 622 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 EXOC8Q8IYI6 725 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 CCDC170Q8IYT3 715 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ATP2A3Q93084 1043 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ANKRD36BP1Q96IX9 119 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 PARK7Q99497 189 aaKnown RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 PLA2G12BQ9BX93 195 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 RRAGCQ9HB90 399 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 OGFRQ9NZT2 677 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 hCG_1984214I3L0E3 225 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ARHGAP6O43182 974 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ZNF713Q8N859 430 aaPredicted RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 GJA10Q969M2 543 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 FAM84BQ96KN1 310 aaPredicted RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 LMBRD1Q9NUN5 540 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 TXNDC9O14530 226 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 SARNPP82979 210 aaKnown RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 MTERF2Q49AM1 385 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 RUFY4Q6ZNE9 571 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 TTC30BQ8N4P2 665 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 ARMCX3Q9UH62 379 aaPredicted RBP15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 MROH2AA6NES4 1674 aa15.53■□□□□ 0.08
PCDHA11-201ENST00000398640 GBP6Q6ZN66 633 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 MAIP1Q8WWC4 291 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 SLC7A3Q8WY07 619 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 FAM49AQ9H0Q0 323 aaPredicted RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 HERC5Q9UII4 1024 aaKnown RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 DDX41Q9UJV9 622 aaKnown RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 XPOTO43592 962 aaKnown RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 EPHX2P34913 555 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 MAGED2Q9UNF1 606 aaPredicted RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 KIAA1024Q9UPX6 916 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 FOXO4P98177 505 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 PPP2R5AQ15172 486 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 CHMP6Q96FZ7 201 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 RSRC1Q96IZ7 334 aaKnown RBP15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 GCNAQ96QF7 691 aa15.52■□□□□ 0.08
PCDHA11-201ENST00000398640 PIGSQ96S52 555 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms