RNA–Protein interactions for RNA: ENST00000398510.7

CHD9-202, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 1 (best) BASIC

Gene CHD9, Length 11,337 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-202ENST00000398510 PIM2Q9P1W9 311 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TDRD15B5MCY1 1934 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 ZNF644Q9H582 1327 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 SPECC1L-ADORA2AF8WAN1 911 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 UBXN8O00124 270 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 F13A1P00488 732 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PSAPP07602 524 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 POLR2MP0CAP2 368 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PCSK2P16519 638 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ARHGDIAP52565 204 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 IDI1Q13907 227 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 DBN1Q16643 649 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ME3Q16798 604 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 KAZNQ674X7 775 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 ACAP3Q96P50 834 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SRPK1Q96SB4 655 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 SERPINI1Q99574 410 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 COL4A3BPQ9Y5P4 624 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 PPP1R12AO14974 1030 aaPredicted RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 LIG4P49917 911 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 COG7P83436 770 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TKFCQ3LXA3 575 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 CFAP221Q4G0U5 840 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 MCPH1Q8NEM0 835 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 RSAD2Q8WXG1 361 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 RSRC1Q96IZ7 334 aaKnown RBP2.96□□□□□ -1.94
CHD9-202ENST00000398510 KIF9Q9HAQ2 790 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 VAT1LQ9HCJ6 419 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 NMRK1Q9NWW6 199 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 SCINQ9Y6U3 715 aa2.96□□□□□ -1.94
CHD9-202ENST00000398510 TRAF5O00463 557 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZNF197O14709 1029 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RNF8O76064 485 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 HSPA6P17066 643 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PIK3CAP42336 1068 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 HDLBPQ00341 1268 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 PTK2BQ14289 1009 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 INAVAQ3KP66 663 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ARHGAP15Q53QZ3 475 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 DENND2CQ68D51 928 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 POTEDQ86YR6 584 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PANK1Q8TE04 598 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TNIP3Q96KP6 325 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZNF560Q96MR9 790 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TRIM54Q9BYV2 358 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 C2orf40Q9H1Z8 148 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MRPL47Q9HD33 250 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 VTI1BQ9UEU0 232 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SERPINA10Q9UK55 444 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 COPG1Q9Y678 874 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 CPSF1Q10570 1443 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 WDR19Q8NEZ3 1342 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 DENND3A2RUS2 1198 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SMCO2A6NFE2 343 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP17L12C9JPN9 530 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP17L21D6R901 530 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GGPS1O95749 300 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ETFBP38117 255 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RCN2Q14257 317 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 COPS6Q7L5N1 327 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 YAF2Q8IY57 180 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RPUSD2Q8IZ73 545 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZNF248Q8NDW4 579 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 LRRC8CQ8TDW0 803 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 SLC26A6Q9BXS9 759 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TAF1LQ8IZX4 1826 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ZMYM6O95789 1325 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RASGRF2O14827 1237 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MAP3K13O43283 966 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 APBA3O96018 575 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GARTP22102 1010 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 AARSP49588 968 aaKnown RBP eCLIP2.95□□□□□ -1.943e-6■■■■■ 61.8
CHD9-202ENST00000398510 GUCY1B3Q02153 619 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CC2D1AQ6P1N0 951 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 SRLQ86TD4 932 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GBP7Q8N8V2 638 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 CHPF2Q9P2E5 772 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 MYO1AQ9UBC5 1043 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CDV3Q9UKY7 258 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 LAMA4Q16363 1823 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ROBO1Q9Y6N7 1651 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 CLUHO75153 1309 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 PASKQ96RG2 1323 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RGPD2P0DJD1 1756 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 HGSO14964 777 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 SPOPO43791 374 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ANXA11P50995 505 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 RAB27AP51159 221 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 LAMC2Q13753 1193 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 ITPRIPL1Q6GPH6 555 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 METTL3Q86U44 580 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 SRBD1Q8N5C6 995 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 NECAB1Q8N987 351 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 GADD45GIP1Q8TAE8 222 aaPredicted RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 CALML6Q8TD86 181 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 TMEM237Q96Q45 408 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RBSNQ9H1K0 784 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 RPF1Q9H9Y2 349 aaKnown RBP2.95□□□□□ -1.94
CHD9-202ENST00000398510 PLEKHA5Q9HAU0 1116 aa2.95□□□□□ -1.94
CHD9-202ENST00000398510 USP31Q70CQ4 1352 aa2.95□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms