RNA–Protein interactions for RNA: ENST00000398193.8

RGPD1-201, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 5,425 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-201ENST00000398193 PP2D1A8MPX8 630 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L15C9J2P7 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L13C9JLJ4 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L11C9JVI0 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L18D6R9N7 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L22D6RA61 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L17D6RBQ6 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L19D6RCP7 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L20D6RJB6 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 EIF3DO15371 548 aaKnown RBP eCLIP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 COPB2P35606 906 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF76P36508 570 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L24Q0WX57 530 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 KRT31Q15323 416 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ISM2Q6H9L7 571 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 USP17L6PQ6QN14 398 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 RBM46Q8TBY0 533 aaKnown RBP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 NUP88Q99567 741 aaPredicted RBP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 DNM3Q9UQ16 869 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MYMKA6NI61 221 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MSH4O15457 936 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MAFGO15525 162 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 PLA2G4BP0C869 781 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 SNRPFP62306 86 aaKnown RBP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 TUBB2AQ13885 445 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 EPHA7Q15375 998 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF662Q6ZS27 426 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 TUBB2BQ9BVA1 445 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 TEKT3Q9BXF9 490 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 PHLPP2Q6ZVD8 1323 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 SBF1O95248 1867 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 PSMD10O75832 226 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 LYPLA2O95372 231 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ABCD1P33897 745 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MYRIPQ8NFW9 859 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 LRRC15Q8TF66 581 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MXRA8Q9BRK3 442 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF541Q9H0D2 1346 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 A0A087WWV3 80 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 DYNC1I1O14576 645 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 BACE1P56817 501 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 EDRF1Q3B7T1 1238 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 FILIP1Q7Z7B0 1213 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF280CQ8ND82 737 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF507Q8TCN5 953 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 DNAJC19Q96DA6 116 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF830Q96NB3 372 aaPredicted RBP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 FEZ1Q99689 392 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 PANK4Q9NVE7 773 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 CGNQ9P2M7 1197 aaKnown RBP8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ODF2LQ9ULJ1 636 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 UBIAD1Q9Y5Z9 338 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 ZNF536O15090 1300 aa8.23□□□□□ -1.09
RGPD1-201ENST00000398193 MEIS1O00470 390 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 SHROOM1Q2M3G4 852 aaPredicted RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 B3GNT9Q6UX72 402 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 MB21D1Q8N884 522 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 CLEC4DQ8WXI8 215 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 KIFC2Q96AC6 838 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 TRIM47Q96LD4 638 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 ADARB2Q9NS39 739 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 DBR1Q9UK59 544 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 CCPG1Q9ULG6 757 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 SLC16A3O15427 465 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 COASYQ13057 564 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 MCM6Q14566 821 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 R3HDM1Q15032 1099 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 PRR16Q569H4 304 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 SMYD5Q6GMV2 418 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 STXBP4Q6ZWJ1 553 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 TMTC1Q8IUR5 882 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 BAG1Q99933 345 aaPredicted RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 SPON1Q9HCB6 807 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 TBC1D22BQ9NU19 505 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 PCDHA2Q9Y5H9 948 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 SSC5DA1L4H1 1573 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 MFAP3LO75121 409 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 CEP55Q53EZ4 464 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 MYOCDQ8IZQ8 938 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 ERGIC2Q96RQ1 377 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 ZNHIT6Q9NWK9 470 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 CTDP1Q9Y5B0 961 aaPredicted RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 JAK3P52333 1124 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 RASSF7Q02833 373 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 USH1GQ495M9 461 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 FKBP15Q5T1M5 1219 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 TRMT44Q8IYL2 757 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 DDX12PQ92771 950 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 NUCKS1Q9H1E3 243 aaKnown RBP8.22□□□□□ -1.09
RGPD1-201ENST00000398193 FAM184BQ9ULE4 1060 aa8.22□□□□□ -1.09
RGPD1-201ENST00000398193 POTEMA6NI47 508 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 FAM86B1E9PN63 330 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 CALUO43852 315 aaPredicted RBP8.21□□□□□ -1.09
RGPD1-201ENST00000398193 DKC1O60832 514 aaKnown RBP eCLIP8.21□□□□□ -1.09
RGPD1-201ENST00000398193 FAM86B2P0C5J1 330 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 DSG3P32926 999 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 ENPEPQ07075 957 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 TXLNBQ8N3L3 684 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 TC2NQ8N9U0 490 aa8.21□□□□□ -1.09
RGPD1-201ENST00000398193 DUSP9Q99956 384 aaKnown RBP8.21□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms