RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 TMEM102Q8N9M5 508 aaPredicted RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CENPIQ92674 756 aaPredicted RBP7.8□□□□□ -1.16
SMCO1-201ENST00000397537 VMP1Q96GC9 406 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 TMEM98Q9Y2Y6 226 aa7.8□□□□□ -1.16
SMCO1-201ENST00000397537 CENPJQ9HC77 1338 aaPredicted RBP7.79□□□□□ -1.16
SMCO1-201ENST00000397537 METTL12A8MUP2 240 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 AHCYL1O43865 530 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 XYLBO75191 536 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 SOD2P04179 222 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 POLR2BP30876 1174 aaKnown RBP7.79□□□□□ -1.16
SMCO1-201ENST00000397537 ELF1P32519 619 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 SLC14A2Q15849 920 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 SPRED3Q2MJR0 410 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 GNPTABQ3T906 1256 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 CLRN3Q8NCR9 226 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 BTN2A2Q8WVV5 523 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 DIO2Q92813 273 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 SLC9A7Q96T83 725 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 MAP3K14Q99558 947 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 CCDC39Q9UFE4 941 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 STAP2Q9UGK3 403 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 MRFAP1Q9Y605 127 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 NPATQ14207 1427 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 GPRASP1Q5JY77 1395 aa7.79□□□□□ -1.16
SMCO1-201ENST00000397537 EFCAB14O75071 495 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 TBX18O95935 607 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ATP1A3P13637 1013 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ZNF132P52740 706 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 GABREP78334 506 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 IRX3P78415 501 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 RPL6Q02878 288 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 PTPN11Q06124 597 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 SART3Q15020 963 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 HIF1AQ16665 826 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ATAT1Q5SQI0 421 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 NUGGCQ68CJ6 796 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 INTS3Q68E01 1043 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 NEK10Q6ZWH5 1172 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ANKLE2Q86XL3 938 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 TMTC1Q8IUR5 882 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 EGFL6Q8IUX8 553 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ZNF513Q8N8E2 541 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 PPP1R35Q8TAP8 253 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 DIS3LQ8TF46 1054 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 LSM14BQ9BX40 385 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 NIFKQ9BYG3 293 aaKnown RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 BRD9Q9H8M2 597 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 CDKN2AIPQ9NXV6 580 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 SUSD2Q9UGT4 822 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 DNTTP04053 509 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ITGAVP06756 1048 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 DHRS4L1P0CG22 281 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 FSHRP23945 695 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 AKAP5P24588 427 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ANO4Q32M45 955 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 OVOS1Q6IE37 1185 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ABHD17CQ6PCB6 329 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 CMIPQ8IY22 773 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 TEX11Q8IYF3 940 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ESX1Q8N693 406 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 PCYOX1LQ8NBM8 494 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ATG4CQ96DT6 458 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ZKSCAN3Q9BRR0 538 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 UBN1Q9NPG3 1134 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 SPTLC3Q9NUV7 552 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 GPN3Q9UHW5 284 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 ZNF214Q9UL59 606 aaPredicted RBP7.78□□□□□ -1.16
SMCO1-201ENST00000397537 RABL2BQ9UNT1 228 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 GPR34Q9UPC5 381 aa7.78□□□□□ -1.16
SMCO1-201ENST00000397537 FSD2A1L4K1 749 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 BLACEA4D250 179 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 P4HA2O15460 535 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 TBX1O43435 398 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 HRO43593 1189 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 HTR3BO95264 441 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 APPP05067 770 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 ACPPP15309 386 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 NME1P15531 152 aaKnown RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 TNFSF4P23510 183 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 KIF5BP33176 963 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 KRT9P35527 623 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 PIK3CBP42338 1070 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 FXR1P51114 621 aaKnown RBP eCLIP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 DHX9Q08211 1270 aaKnown RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 FAPQ12884 760 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 DCTN1Q14203 1278 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 DDB1Q16531 1140 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 MEA1Q16626 185 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 HECTD3Q5T447 861 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 CPLX2Q6PUV4 134 aaKnown RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 BTLAQ7Z6A9 289 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 TEX9Q8N6V9 391 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 SMARCC1Q92922 1105 aaPredicted RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 TEKT5Q96M29 485 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 TRIT1Q9H3H1 467 aaKnown RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 CAMSAP3Q9P1Y5 1249 aaPredicted RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 PRDM4Q9UKN5 801 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 PA2G4Q9UQ80 394 aaKnown RBP7.77□□□□□ -1.17
SMCO1-201ENST00000397537 JAG2Q9Y219 1238 aa7.77□□□□□ -1.17
SMCO1-201ENST00000397537 MASP2O00187 686 aa7.76□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms