RNA–Protein interactions for RNA: ENST00000397428.7

SYNE4-203, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 382 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-203ENST00000397428 KIAA0753Q2KHM9 967 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 SPRED2Q7Z698 418 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 TMCO2Q7Z6W1 182 aaPredicted RBP13.9□□□□□ -0.18
SYNE4-203ENST00000397428 HLA-CQ95604 372 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 PDCD2LQ9BRP1 358 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 ALG1Q9BT22 464 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 KATNAL1Q9BW62 490 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 CNNM2Q9H8M5 875 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 DIAPH3Q9NSV4 1193 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 RAPGEFL1Q9UHV5 662 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 MRVI1Q9Y6F6 885 aa13.9□□□□□ -0.18
SYNE4-203ENST00000397428 PRRC2BQ5JSZ5 2229 aaKnown RBP13.89□□□□□ -0.19
SYNE4-203ENST00000397428 DHX16O60231 1041 aaKnown RBP13.89□□□□□ -0.19
SYNE4-203ENST00000397428 EFCAB14O75071 495 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 GJB5O95377 273 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 SP2Q02086 613 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 MBTPS1Q14703 1052 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 CELF3Q5SZQ8 465 aaKnown RBP13.89□□□□□ -0.19
SYNE4-203ENST00000397428 ZNF618Q5T7W0 954 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 WNT8BQ93098 351 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 ZBED2Q9BTP6 218 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 C1QTNF1Q9BXJ1 281 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 SUGCTQ9HAC7 445 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 MAD2L2Q9UI95 211 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 MYH7BA7E2Y1 1941 aa13.89□□□□□ -0.19
SYNE4-203ENST00000397428 LAMA4Q16363 1823 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 ZBTB5O15062 677 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 ZNF200P98182 395 aaPredicted RBP13.88□□□□□ -0.19
SYNE4-203ENST00000397428 MKRN4PQ13434 485 aaPredicted RBP13.88□□□□□ -0.19
SYNE4-203ENST00000397428 SLC35G1Q2M3R5 365 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 HSDL1Q3SXM5 330 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 IFIT1BQ5T764 474 aaKnown RBP13.88□□□□□ -0.19
SYNE4-203ENST00000397428 CYB5R4Q7L1T6 521 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 SERINC5Q86VE9 423 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 UBAC1Q9BSL1 405 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 C16orf70Q9BSU1 422 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 RIOX1Q9H6W3 641 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 PCDHA1Q9Y5I3 950 aa13.88□□□□□ -0.19
SYNE4-203ENST00000397428 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.87□□□□□ -0.19
SYNE4-203ENST00000397428 MYCLP12524 364 aaPredicted RBP13.87□□□□□ -0.19
SYNE4-203ENST00000397428 HOXC8P31273 242 aa13.87□□□□□ -0.19
SYNE4-203ENST00000397428 TRAF1Q13077 416 aa13.87□□□□□ -0.19
SYNE4-203ENST00000397428 PGM5Q15124 567 aa13.87□□□□□ -0.19
SYNE4-203ENST00000397428 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.87□□□□□ -0.19
SYNE4-203ENST00000397428 EPHX3Q9H6B9 360 aa13.87□□□□□ -0.19
SYNE4-203ENST00000397428 MYH6P13533 1939 aa13.87□□□□□ -0.19
SYNE4-203ENST00000397428 LINC01553A4QN01 128 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 LGR5O75473 907 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 ZNF286BP0CG31 522 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 HOXA13P31271 388 aaPredicted RBP13.86□□□□□ -0.19
SYNE4-203ENST00000397428 IL31RAQ8NI17 732 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 SPATA33Q96N06 139 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 TGS1Q96RS0 853 aaKnown RBP13.86□□□□□ -0.19
SYNE4-203ENST00000397428 IL25Q9H293 177 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 BCAS3Q9H6U6 928 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 INSL6Q9Y581 213 aa13.86□□□□□ -0.19
SYNE4-203ENST00000397428 RSPH10B2B2RC85 870 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 H3BRB1 525 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 GCOM1H8Y6P7 765 aaPredicted RBP13.85□□□□□ -0.19
SYNE4-203ENST00000397428 CYTH3O43739 400 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 GGPS1O95749 300 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 RSPH10BP0C881 870 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 POLR2MP0CAP2 368 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 HTRA4P83105 476 aaPredicted RBP13.85□□□□□ -0.19
SYNE4-203ENST00000397428 GRM4Q14833 912 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 PLEKHG4Q58EX7 1191 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 DBF4BQ8NFT6 615 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 GPKOWQ92917 476 aaPredicted RBP eCLIP13.85□□□□□ -0.19
SYNE4-203ENST00000397428 TUT1Q9H6E5 874 aaKnown RBP13.85□□□□□ -0.19
SYNE4-203ENST00000397428 ARIH1Q9Y4X5 557 aaPredicted RBP13.85□□□□□ -0.19
SYNE4-203ENST00000397428 EMSYQ7Z589 1322 aa13.85□□□□□ -0.19
SYNE4-203ENST00000397428 NCOR1O75376 2440 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 PNMA6FA0A0J9YX94 578 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 SPATA31C2B4DYI2 1134 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 RBAK-RBAKDNI3L0D1 243 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 UBA1P22314 1058 aaKnown RBP13.84□□□□□ -0.19
SYNE4-203ENST00000397428 ICAM3P32942 547 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 THPOP40225 353 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 MRPS9P82933 396 aaKnown RBP13.84□□□□□ -0.19
SYNE4-203ENST00000397428 SP7Q8TDD2 431 aaPredicted RBP13.84□□□□□ -0.19
SYNE4-203ENST00000397428 GDPD5Q8WTR4 605 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 ZFP91Q96JP5 570 aaPredicted RBP13.84□□□□□ -0.19
SYNE4-203ENST00000397428 PIGSQ96S52 555 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 LRFN3Q9BTN0 628 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 RNPEPQ9H4A4 650 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 MLXIPQ9HAP2 919 aa13.84□□□□□ -0.19
SYNE4-203ENST00000397428 SORBS3O60504 671 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 STAM2O75886 525 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 AMHP03971 560 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 CCND2P30279 289 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 PLA2G5P39877 138 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 TROAPQ12815 778 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 FCHSD1Q86WN1 690 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 KHSRPQ92945 711 aaKnown RBP eCLIP13.83□□□□□ -0.2
SYNE4-203ENST00000397428 ATP6V0A1Q93050 837 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 TOP1MTQ969P6 601 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 OSBPL7Q9BZF2 842 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 SENP2Q9HC62 589 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 CD320Q9NPF0 282 aa13.83□□□□□ -0.2
SYNE4-203ENST00000397428 C17orf102A2RUQ5 167 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms