RNA–Protein interactions for RNA: ENST00000397408.5

TSPAN4-206, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TSPAN4, Length 1,430 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-206ENST00000397408 PHF20Q9BVI0 1012 aa24.2■■□□□ 1.46
TSPAN4-206ENST00000397408 ASGR1P07306 291 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 ITGB5P18084 799 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 ICAM3P32942 547 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 CPT1AP50416 773 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 FOSBP53539 338 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 ARHGAP1Q07960 439 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 GALNT17Q6IS24 598 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 UBIAD1Q9Y5Z9 338 aa24.19■■□□□ 1.46
TSPAN4-206ENST00000397408 SPATA31C2B4DYI2 1134 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 ZEB2O60315 1214 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 TGFB3P10600 412 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 ATN1P54259 1190 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 GPRASP2Q96D09 838 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 ALPK3Q96L96 1907 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 SORBS3O60504 671 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 GGPS1O95749 300 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 SP2Q02086 613 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 MTMR1Q13613 665 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 BRDTQ58F21 947 aaPredicted RBP24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 DHX37Q8IY37 1157 aaKnown RBP24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 AFG1LQ8WV93 481 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 JADE2Q9NQC1 790 aa24.18■■□□□ 1.46
TSPAN4-206ENST00000397408 DNAH12Q6ZR08 3092 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 MYH7BA7E2Y1 1941 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 M0R2N6 131 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 HMGN5P82970 282 aaKnown RBP24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 LRRC26Q2I0M4 334 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 CXCL17Q6UXB2 119 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 CRYGNQ8WXF5 182 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 DPF3Q92784 378 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 CDHR1Q96JP9 859 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 GLT1D1Q96MS3 346 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 MXRA8Q9BRK3 442 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 STARD7Q9NQZ5 370 aa24.17■■□□□ 1.46
TSPAN4-206ENST00000397408 A6NJR5 290 aa24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 ZNF76P36508 570 aa24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 LAMC2Q13753 1193 aa24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 CEP55Q53EZ4 464 aa24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 CELF3Q5SZQ8 465 aaKnown RBP24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 CYP2W1Q8TAV3 490 aa24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 EMID1Q96A84 441 aaPredicted RBP24.16■■□□□ 1.46
TSPAN4-206ENST00000397408 MMP3P08254 477 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 MYL3P08590 195 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 TRIM29Q14134 588 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 MYSM1Q5VVJ2 828 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 SLC39A5Q6ZMH5 540 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 MLXIPQ9HAP2 919 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 POLR3EQ9NVU0 708 aa24.15■■□□□ 1.46
TSPAN4-206ENST00000397408 CYP3A4P08684 503 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 NEDD9Q14511 834 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 KRT25Q7Z3Z0 450 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 FAM184AQ8NB25 1140 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 PPTC7Q8NI37 304 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 OXER1Q8TDS5 423 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 VTI1AQ96AJ9 217 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 SPATA33Q96N06 139 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 BCAS3Q9H6U6 928 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 PKD2L1Q9P0L9 805 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 DOCK5Q9H7D0 1870 aa24.14■■□□□ 1.45
TSPAN4-206ENST00000397408 EVI5O60447 810 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 CABYRO75952 493 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 PURAQ00577 322 aaKnown RBP24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 SNX17Q15036 470 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 KRT40Q6A162 431 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 CYFIP1Q7L576 1253 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 TBCKQ8TEA7 893 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 SENP7Q9BQF6 1050 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 BRMS1Q9HCU9 246 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 KCNH7Q9NS40 1196 aa24.13■■□□□ 1.45
TSPAN4-206ENST00000397408 ELP1O95163 1332 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 FAM86B1E9PN63 330 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 MEIS1O00470 390 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 ATP9AO75110 1047 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 FAM86B2P0C5J1 330 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 KCNA2P16389 499 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 KRT2P35908 639 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 RTP1P59025 263 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 NONOQ15233 471 aaKnown RBP eCLIP24.12■■□□□ 1.454e-6■■■■□ 24.4
TSPAN4-206ENST00000397408 HSDL1Q3SXM5 330 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 METTL7BQ6UX53 244 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 NIPA1Q7RTP0 329 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 C7orf61Q8IZ16 206 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 C8orf76Q96K31 380 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 ATP11BQ9Y2G3 1177 aa24.12■■□□□ 1.45
TSPAN4-206ENST00000397408 A0A0U1RQG5 324 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 CCDC194A0A1B0GVG4 234 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 MAFGO15525 162 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 MMP1P03956 469 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 ARP10275 920 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 GUCY1B3Q02153 619 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 TRIM60Q495X7 471 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 PLA2G4DQ86XP0 818 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 GIMAP8Q8ND71 665 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 MTG1Q9BT17 334 aaPredicted RBP24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 CEP290O15078 2479 aa24.11■■□□□ 1.45
TSPAN4-206ENST00000397408 IGLV3-22A0A075B6J6 115 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 NOP56O00567 594 aaKnown RBP24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 KPNA6O60684 536 aa24.1■■□□□ 1.45
TSPAN4-206ENST00000397408 CIITAP33076 1130 aa24.1■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms