RNA–Protein interactions for RNA: ENST00000397149.3

SMU1-201, Transcript of SMU1, DNA replication regulator and spliceosomal factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMU1, Length 7,122 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMU1-201ENST00000397149 ARMCX3Q9UH62 379 aaPredicted RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 GNA14O95837 355 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ESRRAP11474 423 aaPredicted RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 PLS3P13797 630 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 KRT4P19013 534 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 SCNN1DP51172 638 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 PTK2Q05397 1052 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 CDC37L1Q7L3B6 337 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 OR9Q1Q8NGQ5 310 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 AS3MTQ9HBK9 375 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 POLR3EQ9NVU0 708 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 CAB39Q9Y376 341 aaPredicted RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 RPS6KB1P23443 525 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 MORC3Q14149 939 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 DPY19L2Q6NUT2 758 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 STX19Q8N4C7 294 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 DCPSQ96C86 337 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 ZFP42Q96MM3 310 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 PCIF1Q9H4Z3 704 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 DBNLQ9UJU6 430 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 TOM1O60784 492 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 PLTPP55058 493 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 DMC1Q14565 340 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 OR6B2Q6IFH4 312 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 PCDHA12Q9UN75 941 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 GOLGA8HP0CJ92 632 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 MYL7Q01449 175 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 CCDC142Q17RM4 750 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ARHGAP18Q8N392 663 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 SUPT20HQ8NEM7 779 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ULK4Q96C45 1275 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 VMP1Q96GC9 406 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 FTOQ9C0B1 505 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMU1-201ENST00000397149 MAP10Q9P2G4 905 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.32□□□□□ -0.28
SMU1-201ENST00000397149 N4BP1O75113 896 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 HSPA4LO95757 839 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ATP2B4P23634 1241 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ZC3H18Q86VM9 953 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 SERPINI1Q99574 410 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 SENP1Q9P0U3 644 aa13.32□□□□□ -0.28
SMU1-201ENST00000397149 ANGEL1Q9UNK9 670 aaKnown RBP13.32□□□□□ -0.28
SMU1-201ENST00000397149 GPAA1O43292 621 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 GTF2IP78347 998 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 HDLBPQ00341 1268 aaKnown RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 SGO2Q562F6 1265 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 PBXIP1Q96AQ6 731 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 PSDA5PKW4 1024 aaPredicted RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 WASLO00401 505 aaPredicted RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 GINM1Q9NU53 330 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 H0Y3Z8 333 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 DPYSL4O14531 572 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 HNRNPDLO14979 420 aaKnown RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 KDM1AO60341 852 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 SEC24DO94855 1032 aaPredicted RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 WDR47O94967 919 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 CEP78Q5JTW2 689 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 CENPKQ9BS16 269 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 RGL1Q9NZL6 768 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 EFCAB8A8MWE9 144 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 ENC1O14682 589 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 ADCY3O60266 1144 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 SIX6OS1Q8N1H7 587 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 PSTPIP2Q9H939 334 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 POLR2MP0CAP2 368 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 KPNA2P52292 529 aaKnown RBP13.31□□□□□ -0.28
SMU1-201ENST00000397149 GRIN1Q05586 938 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 LRRC74AQ0VAA2 488 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 WASHC5Q12768 1159 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 RGS9BPQ6ZS82 235 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 ZWILCHQ9H900 591 aa13.31□□□□□ -0.28
SMU1-201ENST00000397149 DOK7Q18PE1 504 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 CCDC92Q53HC0 331 aaPredicted RBP13.3□□□□□ -0.28
SMU1-201ENST00000397149 RNF135Q8IUD6 432 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 JPH2Q9BR39 696 aaPredicted RBP13.3□□□□□ -0.28
SMU1-201ENST00000397149 CXCR5P32302 372 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 C10orf76Q5T2E6 689 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 ST13P4Q8IZP2 240 aaPredicted RBP13.3□□□□□ -0.28
SMU1-201ENST00000397149 TMEM87BQ96K49 555 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 ANGPTL2Q9UKU9 493 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 ATP11BQ9Y2G3 1177 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 ATAD2BQ9ULI0 1458 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 CCDC195A0A1B0GUA6 201 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 PDHA1P08559 390 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 GOLGA8FQ08AF8 430 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 ADAM9Q13443 819 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 RFX8Q6ZV50 586 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 NT5C3AQ9H0P0 336 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 RUBCNLQ9H714 662 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 NRBP2Q9NSY0 501 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 MAST3O60307 1309 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 TMCC1O94876 653 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 TRPC1P48995 793 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 TSPY1Q01534 308 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 PDE11AQ9HCR9 933 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 RBBP7Q16576 425 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 BBS9Q3SYG4 887 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 PLA2G4DQ86XP0 818 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 CHURC1Q8WUH1 139 aa13.3□□□□□ -0.28
SMU1-201ENST00000397149 TEKT3Q9BXF9 490 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms