RNA–Protein interactions for RNA: ENST00000397030.5

MCF2L-208, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2 BASIC

Gene MCF2L, Length 6,580 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-208ENST00000397030 KANSL2Q9H9L4 492 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 PI4KBQ9UBF8 816 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 UPP2O95045 317 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 PFKFB1P16118 471 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 MTMR3Q13615 1198 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CTTNQ14247 550 aaKnown RBP18.93■□□□□ 0.62
MCF2L-208ENST00000397030 FAM117BQ6P1L5 589 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 ARHGAP6O43182 974 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 CAPN15O75808 1086 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 PTGDRQ13258 359 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 SUCLA2Q9P2R7 463 aaPredicted RBP18.93■□□□□ 0.62
MCF2L-208ENST00000397030 MED7O43513 233 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 ARHGAP4P98171 946 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 DBN1Q16643 649 aa18.93■□□□□ 0.62
MCF2L-208ENST00000397030 MSTO1Q9BUK6 570 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 HSPD1P10809 573 aaKnown RBP18.92■□□□□ 0.62
MCF2L-208ENST00000397030 LTKP29376 864 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 MAPK4P31152 587 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 CDC37Q16543 378 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-208ENST00000397030 MGEA5O60502 916 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 ARMCX2Q7L311 632 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 NDUFAF2Q8N183 169 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 PIK3C2GO75747 1445 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 ASPHQ12797 758 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 GPATCH4Q5T3I0 446 aaKnown RBP18.92■□□□□ 0.62
MCF2L-208ENST00000397030 DDX53Q86TM3 631 aaKnown RBP18.92■□□□□ 0.62
MCF2L-208ENST00000397030 TRPC7Q9HCX4 862 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 MAP3K1Q13233 1512 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 GADD45BO75293 160 aaPredicted RBP18.92■□□□□ 0.62
MCF2L-208ENST00000397030 FGAP02671 866 aa18.92■□□□□ 0.62
MCF2L-208ENST00000397030 ECE2O60344 883 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 YWHAHQ04917 246 aaPredicted RBP18.91■□□□□ 0.62
MCF2L-208ENST00000397030 ZWILCHQ9H900 591 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 SERPINB13Q9UIV8 391 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 GOLGA8FQ08AF8 430 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 GOLGA8DPQ0D2H9 430 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 HNRNPCL2B2RXH8 293 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 HNRNPCL1O60812 293 aaKnown RBP18.91■□□□□ 0.62
MCF2L-208ENST00000397030 INHBAP08476 426 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 PSMC2P35998 433 aaKnown RBP18.91■□□□□ 0.62
MCF2L-208ENST00000397030 KRBA2Q6ZNG9 492 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 THNSL1Q8IYQ7 743 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 SYNE4Q8N205 404 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 CDHR1Q96JP9 859 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 CHL1O00533 1208 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 PRKAB2O43741 272 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 SLC27A3Q5K4L6 730 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 FAM83BQ5T0W9 1011 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 PCDHA4Q9UN74 947 aa18.91■□□□□ 0.62
MCF2L-208ENST00000397030 CYP2D7A0A087X1C5 515 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 ZNF335Q9H4Z2 1342 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 F5H423 210 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 ME3Q16798 604 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 UBE2TQ9NPD8 197 aaPredicted RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 SLC4A7Q9Y6M7 1214 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 PDE8BO95263 885 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 KCNJ6P48051 423 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 PTH1RQ03431 593 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 RC3H1Q5TC82 1133 aaKnown RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 TBCKQ8TEA7 893 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 LMNTD2Q8IXW0 634 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 C10orf67Q8IYJ2 551 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 PRPSAP2O60256 369 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 NR2F2P24468 414 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 R3HDM1Q15032 1099 aaKnown RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 FRA10AC1Q70Z53 315 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 WHAMMQ8TF30 809 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 DESI2Q9BSY9 194 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 SUFUQ9UMX1 484 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 G3BP2Q9UN86 482 aaKnown RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 BTBD18B2RXH4 712 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 MYL1P05976 194 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 STX1BP61266 288 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 BASP1P80723 227 aaKnown RBP18.9■□□□□ 0.62
MCF2L-208ENST00000397030 TMC4Q7Z404 712 aa18.9■□□□□ 0.62
MCF2L-208ENST00000397030 MCF2LO15068 1137 aa18.89■□□□□ 0.62
MCF2L-208ENST00000397030 GH2P01242 217 aa18.89■□□□□ 0.62
MCF2L-208ENST00000397030 SERPINB6P35237 376 aa18.89■□□□□ 0.62
MCF2L-208ENST00000397030 NNMTP40261 264 aa18.89■□□□□ 0.62
MCF2L-208ENST00000397030 CACNB2Q08289 660 aaPredicted RBP18.89■□□□□ 0.62
MCF2L-208ENST00000397030 DNAJC24Q6P3W2 148 aa18.89■□□□□ 0.62
MCF2L-208ENST00000397030 MYO1FO00160 1098 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 TSPY1Q01534 308 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 ARL13BQ3SXY8 428 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 MX2P20592 715 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 ZNF75DP51815 510 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 C17orf53Q8N3J3 647 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-208ENST00000397030 SESN3P58005 492 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 GALNT17Q6IS24 598 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 HPCAL4Q9UM19 191 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 RASSF7Q02833 373 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 CC2D1AQ6P1N0 951 aaPredicted RBP18.89■□□□□ 0.61
MCF2L-208ENST00000397030 SLC17A8Q8NDX2 589 aa18.89■□□□□ 0.61
MCF2L-208ENST00000397030 TDRD3Q9H7E2 651 aaKnown RBP18.89■□□□□ 0.61
MCF2L-208ENST00000397030 BLMP54132 1417 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 AOX1Q06278 1338 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 PRAMEF22A3QJZ6 481 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SEC24BO95487 1268 aa18.88■□□□□ 0.61
MCF2L-208ENST00000397030 ZNF157P51786 506 aaPredicted RBP18.88■□□□□ 0.61
MCF2L-208ENST00000397030 SNRNP48Q6IEG0 339 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms