RNA–Protein interactions for RNA: ENST00000396578.7

COL4A3-202, Transcript of collagen type IV alpha 3 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL4A3, Length 8,097 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A3-202ENST00000396578 NOP14P78316 857 aaKnown RBP15.1■□□□□ 0.01
COL4A3-202ENST00000396578 PARD3BQ8TEW8 1205 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 GCNT4Q9P109 453 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 ABCC12Q96J65 1359 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 WDR91A4D1P6 747 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 DTNBO60941 627 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 SLCO1A2P46721 670 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 E2F4Q16254 413 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 CCNYQ8ND76 341 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 SUPT20HQ8NEM7 779 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 NEK9Q8TD19 979 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 AK8Q96MA6 479 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 KIAA1024Q9UPX6 916 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 KIF1BO60333 1816 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 MED7O43513 233 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 CREB3O43889 395 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 FLOT2Q14254 428 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 PNMA1Q8ND90 353 aa15.1■□□□□ 0.01
COL4A3-202ENST00000396578 KIF19Q2TAC6 998 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ODR4Q5SWX8 454 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 NRBP1Q9UHY1 535 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ZMYM3Q14202 1370 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ZNF233A6NK53 670 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 KLRF2D3W0D1 207 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 KRT1P04264 644 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 PYGBP11216 843 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ATP6V0A1Q93050 837 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ABCD1P33897 745 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 MAGEA9P43362 315 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 DR1Q01658 176 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 TDRD7Q8NHU6 1098 aaKnown RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 CARMIL3Q8ND23 1372 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 LRRN2O75325 713 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 IFNL3Q8IZI9 196 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 CPSF3Q9UKF6 684 aaKnown RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 H0YIN7 160 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 IKBKBO14920 756 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 HNRNPDLO14979 420 aaKnown RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 GYG2O15488 501 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 PCP11498 1178 aaKnown RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ENOX1Q8TC92 643 aaKnown RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ING2Q9H160 280 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ZNF408Q9H9D4 720 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 SUFUQ9UMX1 484 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 USP19O94966 1318 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 ATP2B4P23634 1241 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 FBXO11Q86XK2 927 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 A0A1W2PQ27 194 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 A0A1W2PQ64 194 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 A0A1W2PQD8 194 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 GAP43P17677 238 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 MAN2A1Q16706 1144 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 NBPF9Q3BBW0 867 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 FAM160B1Q5W0V3 765 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 TRIM67Q6ZTA4 783 aa15.09■□□□□ 0.01
COL4A3-202ENST00000396578 GPKOWQ92917 476 aaPredicted RBP eCLIP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 FOXP1Q9H334 677 aaPredicted RBP15.09■□□□□ 0.01
COL4A3-202ENST00000396578 CASP8Q14790 479 aa15.08■□□□□ 0.01
COL4A3-202ENST00000396578 LARP4BQ92615 738 aaKnown RBP15.08■□□□□ 0.01
COL4A3-202ENST00000396578 NHEJ1Q9H9Q4 299 aaPredicted RBP15.08■□□□□ 0.01
COL4A3-202ENST00000396578 SUGCTQ9HAC7 445 aa15.08■□□□□ 0.01
COL4A3-202ENST00000396578 PALMDQ9NP74 551 aa15.08■□□□□ 0.01
COL4A3-202ENST00000396578 MOCS3O95396 460 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 ZBTB41Q5SVQ8 909 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 PDXDC1Q6P996 788 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 SLC12A6Q9UHW9 1150 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 XPOTO43592 962 aaKnown RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 SERPING1P05155 500 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 DYNLT1P63172 113 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 CENPUQ71F23 418 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 CABLES1Q8TDN4 633 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 SAAL1Q96ER3 474 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 PNMA2Q9UL42 364 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 TRPC5Q9UL62 973 aaPredicted RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 PMLP29590 882 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 PDE6BP35913 854 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 ZNF658Q5TYW1 1059 aaPredicted RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 PARD6BQ9BYG5 372 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 NOVA2Q9UNW9 492 aaKnown RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 LAMC3Q9Y6N6 1575 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 GTPBP10A4D1E9 387 aaKnown RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 RNF217Q8TC41 542 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 CTSWP56202 376 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 PLA2G4DQ86XP0 818 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 LARGE2Q8N3Y3 721 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 PYROXD1Q8WU10 500 aa15.08■□□□□ 0
COL4A3-202ENST00000396578 MAGED2Q9UNF1 606 aaPredicted RBP15.08■□□□□ 0
COL4A3-202ENST00000396578 USP17L12C9JPN9 530 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 USP17L21D6R901 530 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 SLC7A5Q01650 507 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 SPARCL1Q14515 664 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 EEF2KMTQ96G04 330 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 PAWRQ96IZ0 340 aaKnown RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 TMEM247A6NEH6 219 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 ARL4AP40617 200 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 YWHAHQ04917 246 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 SCRN1Q12765 414 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 FAM47CQ5HY64 1035 aa15.07■□□□□ 0
COL4A3-202ENST00000396578 RYBPQ8N488 228 aaPredicted RBP15.07■□□□□ 0
COL4A3-202ENST00000396578 DYDC2Q96IM9 177 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms