RNA–Protein interactions for RNA: ENST00000396410.8

PDXDC1-202, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDXDC1, Length 4,521 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-202ENST00000396410 ZNF831Q5JPB2 1677 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 A0A0U1RQJ8 604 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 CETN3O15182 167 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 STAT3P40763 770 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 CYP27A1Q02318 531 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 CYP4A11Q02928 519 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 AP3B2Q13367 1082 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 ATRIPQ8WXE1 791 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 PNMA5Q96PV4 448 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 DUSP9Q99956 384 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 SAR1BQ9Y6B6 198 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 MEIS1O00470 390 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 PABPC4Q13310 644 aaKnown RBP eCLIP12.81□□□□□ -0.366e-11■■■□□ 18.3
PDXDC1-202ENST00000396410 KIFC2Q96AC6 838 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 MMTAG2Q9BU76 263 aaKnown RBP12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 PCDHAC2Q9Y5I4 1007 aa12.81□□□□□ -0.36
PDXDC1-202ENST00000396410 USP11P51784 963 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 ARHGAP4P98171 946 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 ZNF772Q68DY9 489 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 CCDC170Q8IYT3 715 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 KIAA0895Q8NCT3 520 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 ZBTB9Q96C00 473 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 NUDT12Q9BQG2 462 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 GOPCQ9HD26 462 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 COL24A1Q17RW2 1714 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 KLRG2A4D1S0 409 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 C21orf2O43822 256 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 SNHG28P0DPA3 235 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 DNA2P51530 1060 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 IRF2BP1Q8IU81 584 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 SEMA6BQ9H3T3 888 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 BLOC1S4Q9NUP1 217 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 COL4A3BPQ9Y5P4 624 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 PPP1R12BO60237 982 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 SMCR8Q8TEV9 937 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 CCDC102AQ96A19 550 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 ZHX1Q9UKY1 873 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 GNA14O95837 355 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 GABPB1Q06547 395 aaPredicted RBP12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 ADAM9Q13443 819 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 SPAG5Q96R06 1193 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 CRACR2AQ9BSW2 395 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 TRIM10Q9UDY6 481 aa12.8□□□□□ -0.36
PDXDC1-202ENST00000396410 KIAA1551Q9HCM1 1747 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 RNF225M0QZC1 329 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 FAM13AO94988 1023 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 PNMA6AP0CW24 399 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 MCM3P25205 808 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 MAGEA1P43355 309 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 RAPGEF1Q13905 1077 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 PROM2Q8N271 834 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 LSM14BQ9BX40 385 aaKnown RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 EMILIN3Q9NT22 766 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 STK24Q9Y6E0 443 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 PLIN4Q96Q06 1357 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 RAD17O75943 681 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 NDUFB10O96000 172 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 H2AFXP16104 143 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 BRD3Q15059 726 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 DCAF17Q5H9S7 520 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 DNAJC7Q99615 494 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 SERPINA10Q9UK55 444 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEFA5A3E0 1075 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 ERICH4A6NGS2 130 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEIP0CG38 1075 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 MATR3P43243 847 aaKnown RBP eCLIP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 STAT2P52630 851 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 SLC9C1Q4G0N8 1177 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEGQ6S5H5 508 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 POTEEQ6S8J3 1075 aa12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 PPP1R1BQ9UD71 204 aaPredicted RBP12.79□□□□□ -0.36
PDXDC1-202ENST00000396410 IGKV6D-41A0A0C4DH26 115 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 NPHP3-ACAD11A0A0J9YXS1 232 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 PPP1R11O60927 126 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 HOXA7P31268 230 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 SF3B2Q13435 895 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 STYK1Q6J9G0 422 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 PAFAH1B1P43034 410 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 HDLBPQ00341 1268 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 MAP9Q49MG5 647 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 SFMBT2Q5VUG0 894 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 CENPPQ6IPU0 288 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 TPH2Q8IWU9 490 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 CALUO43852 315 aaPredicted RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 GCNT3O95395 438 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 TNIP1Q15025 636 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 ZNF507Q8TCN5 953 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 TFR2Q9UP52 801 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 POLR2FP61218 127 aaKnown RBP12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 UBXN2AP68543 259 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 DACT2Q5SW24 774 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 KCNK18Q7Z418 384 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 SH2D4AQ9H788 454 aa12.78□□□□□ -0.36
PDXDC1-202ENST00000396410 RPL13P26373 211 aaKnown RBP12.77□□□□□ -0.36
PDXDC1-202ENST00000396410 EIF4A3P38919 411 aaKnown RBP12.77□□□□□ -0.36
PDXDC1-202ENST00000396410 LRRC15Q8TF66 581 aa12.77□□□□□ -0.36
PDXDC1-202ENST00000396410 CHURC1Q8WUH1 139 aa12.77□□□□□ -0.36
PDXDC1-202ENST00000396410 FAM198AQ9UFP1 575 aa12.77□□□□□ -0.36
PDXDC1-202ENST00000396410 GCOM1H8Y6P7 765 aaPredicted RBP12.77□□□□□ -0.37
PDXDC1-202ENST00000396410 POLR2MP0CAP2 368 aa12.77□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms