RNA–Protein interactions for RNA: ENST00000396352.8

HOXA3-202, Transcript of homeobox A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA3, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA3-202ENST00000396352 SH3GL2Q99962 352 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 EDEM3Q9BZQ6 932 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 RIC8AQ9NPQ8 531 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 PODXL2Q9NZ53 605 aa17.39■□□□□ 0.37
HOXA3-202ENST00000396352 NOL4O94818 638 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 RASSF7Q02833 373 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 PROM2Q8N271 834 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 STIM2Q9P246 746 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 GOLGA6CA6NDK9 693 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 GOLGA6DP0CG33 693 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 MATR3P43243 847 aaKnown RBP eCLIP17.38■□□□□ 0.37
HOXA3-202ENST00000396352 FAM76AQ8TAV0 307 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 BBXQ8WY36 941 aaPredicted RBP17.38■□□□□ 0.37
HOXA3-202ENST00000396352 RAB34Q9BZG1 259 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 CD209Q9NNX6 404 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 GOLGA6AQ9NYA3 693 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 TLR2O60603 784 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 TNFRSF8P28908 595 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 HOXA7P31268 230 aaPredicted RBP17.38■□□□□ 0.37
HOXA3-202ENST00000396352 GPSM2P81274 684 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 FAM98CQ17RN3 349 aaKnown RBP17.38■□□□□ 0.37
HOXA3-202ENST00000396352 KRT79Q5XKE5 535 aa17.38■□□□□ 0.37
HOXA3-202ENST00000396352 RBM12Q9NTZ6 932 aaKnown RBP17.38■□□□□ 0.37
HOXA3-202ENST00000396352 COASYQ13057 564 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 ARHGAP27Q6ZUM4 889 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 CACNA2D4Q7Z3S7 1137 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 TSEN2Q8NCE0 465 aaKnown RBP17.37■□□□□ 0.37
HOXA3-202ENST00000396352 TSG101Q99816 390 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 BUB1O43683 1085 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 SNHG28P0DPA3 235 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 EPHB4P54760 987 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 CCDC181Q5TID7 509 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 RNF10Q8N5U6 811 aaKnown RBP17.37■□□□□ 0.37
HOXA3-202ENST00000396352 HAS1Q92839 578 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 FGFBP2Q9BYJ0 223 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 MTMR4Q9NYA4 1195 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 RTCBQ9Y3I0 505 aaKnown RBP17.37■□□□□ 0.37
HOXA3-202ENST00000396352 COL4A3BPQ9Y5P4 624 aa17.37■□□□□ 0.37
HOXA3-202ENST00000396352 KDM4FA0A1W2PPD8 638 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 IL1R1P14778 569 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 PPP4R3AQ6IN85 833 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 MYOCDQ8IZQ8 938 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 NOX5Q96PH1 765 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 LRRC27Q9C0I9 530 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 CEP72Q9P209 647 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 GAKO14976 1311 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 PPP1R11O60927 126 aaPredicted RBP17.36■□□□□ 0.37
HOXA3-202ENST00000396352 PLCG2P16885 1265 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 CLK2P49760 499 aaKnown RBP17.36■□□□□ 0.37
HOXA3-202ENST00000396352 ASPRV1Q53RT3 343 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 TMC4Q7Z404 712 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 LRRC47Q8N1G4 583 aaKnown RBP17.36■□□□□ 0.37
HOXA3-202ENST00000396352 CAVIN3Q969G5 261 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 FAM163AQ96GL9 167 aaPredicted RBP17.36■□□□□ 0.37
HOXA3-202ENST00000396352 TANGO6Q9C0B7 1094 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 UBE2SQ16763 222 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 EMBQ6PCB8 327 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 SYN2Q92777 582 aaPredicted RBP17.36■□□□□ 0.37
HOXA3-202ENST00000396352 GJA10Q969M2 543 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 MS4A14Q96JA4 679 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 NLRC4Q9NPP4 1024 aa17.36■□□□□ 0.37
HOXA3-202ENST00000396352 TNNI2P48788 182 aa17.35■□□□□ 0.37
HOXA3-202ENST00000396352 FKBP3Q00688 224 aaKnown RBP17.35■□□□□ 0.37
HOXA3-202ENST00000396352 CORO7P57737 925 aa17.35■□□□□ 0.37
HOXA3-202ENST00000396352 TDRD12Q587J7 1177 aaKnown RBP17.35■□□□□ 0.37
HOXA3-202ENST00000396352 FAM83BQ5T0W9 1011 aa17.35■□□□□ 0.37
HOXA3-202ENST00000396352 C8orf74Q6P047 294 aa17.35■□□□□ 0.37
HOXA3-202ENST00000396352 IGKV6D-41A0A0C4DH26 115 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 SERPING1P05155 500 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 PAFAH1B1P43034 410 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 IRAK1P51617 712 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 CLEC10AQ8IUN9 316 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 JMJD4Q9H9V9 463 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 PCDHA2Q9Y5H9 948 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 GRIN2DO15399 1336 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 GOLGA8KD6RF30 607 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 UFL1O94874 794 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 EPB41P11171 864 aaKnown RBP17.34■□□□□ 0.37
HOXA3-202ENST00000396352 APBA1Q02410 837 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 SEPT2Q15019 361 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 SLC9C1Q4G0N8 1177 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 PPP1R18Q6NYC8 613 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 PANK4Q9NVE7 773 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 DDX25Q9UHL0 483 aaKnown RBP17.34■□□□□ 0.37
HOXA3-202ENST00000396352 TSKSQ9UJT2 592 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 KIF13BQ9NQT8 1826 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 TRAF5O00463 557 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 MAGEA9P43362 315 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 FAM26FQ5R3K3 315 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 MFSD14BQ5SR56 506 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 HYIQ5T013 277 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 SFMBT2Q5VUG0 894 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 NUCKS1Q9H1E3 243 aaKnown RBP17.34■□□□□ 0.37
HOXA3-202ENST00000396352 GPCPD1Q9NPB8 672 aa17.34■□□□□ 0.37
HOXA3-202ENST00000396352 GABPAQ06546 454 aa17.33■□□□□ 0.37
HOXA3-202ENST00000396352 PPFIA1Q13136 1202 aa17.33■□□□□ 0.37
HOXA3-202ENST00000396352 CCDC40Q4G0X9 1142 aa17.33■□□□□ 0.37
HOXA3-202ENST00000396352 GLE1Q53GS7 698 aaKnown RBP17.33■□□□□ 0.37
HOXA3-202ENST00000396352 TTMPQ5BVD1 217 aa17.33■□□□□ 0.37
HOXA3-202ENST00000396352 LSM14BQ9BX40 385 aaKnown RBP17.33■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms