RNA–Protein interactions for RNA: ENST00000396342.6

DDR1-229, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 675 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-229ENST00000396342 PTH1RQ03431 593 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 XRRA1Q6P2D8 792 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 NLRX1Q86UT6 975 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 GIMAP8Q8ND71 665 aaPredicted RBP18.9■□□□□ 0.62
DDR1-229ENST00000396342 MAP3K14Q99558 947 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 MTA3Q9BTC8 594 aa18.9■□□□□ 0.62
DDR1-229ENST00000396342 LRRC37A2A6NM11 1700 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 C17orf102A2RUQ5 167 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 F2P00734 622 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 RNF20Q5VTR2 975 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 ARNTL2Q8WYA1 636 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 USP26Q9BXU7 913 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 EHMT1Q9H9B1 1298 aa18.89■□□□□ 0.61
DDR1-229ENST00000396342 SORBS3O60504 671 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 CKBP12277 381 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 MYOGP15173 224 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 USP38Q8NB14 1042 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 KAT2BQ92831 832 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 MAP4K1Q92918 833 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 CDHR1Q96JP9 859 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 TMEM87BQ96K49 555 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 ASB2Q96Q27 587 aa18.88■□□□□ 0.61
DDR1-229ENST00000396342 RBM8AQ9Y5S9 174 aaKnown RBP18.88■□□□□ 0.61
DDR1-229ENST00000396342 H3BRB1 525 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 TNFRSF10AO00220 468 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 FIBPO43427 364 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 PRC1O43663 620 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 UBA1P22314 1058 aaKnown RBP18.87■□□□□ 0.61
DDR1-229ENST00000396342 SMARCA1P28370 1054 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 IRX6P78412 446 aaPredicted RBP18.87■□□□□ 0.61
DDR1-229ENST00000396342 TROAPQ12815 778 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 ZNF654Q8IZM8 581 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 SPZ1Q9BXG8 430 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 TUT1Q9H6E5 874 aaKnown RBP18.87■□□□□ 0.61
DDR1-229ENST00000396342 COL6A3P12111 3177 aa18.87■□□□□ 0.61
DDR1-229ENST00000396342 RSPH10B2B2RC85 870 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 PPP1R11O60927 126 aaPredicted RBP18.86■□□□□ 0.61
DDR1-229ENST00000396342 AMHP03971 560 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 RSPH10BP0C881 870 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 THPOP40225 353 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 RBL2Q08999 1139 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 ADGRE1Q14246 886 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 HSDL1Q3SXM5 330 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 ATP6V0A1Q93050 837 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 CERS4Q9HA82 394 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 SLC12A7Q9Y666 1083 aa18.86■□□□□ 0.61
DDR1-229ENST00000396342 SPDYE3A6NKU9 549 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 OPLAHO14841 1288 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 WDR5P61964 334 aaKnown RBP18.85■□□□□ 0.61
DDR1-229ENST00000396342 METTL7BQ6UX53 244 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 TNPO1Q92973 898 aaKnown RBP18.85■□□□□ 0.61
DDR1-229ENST00000396342 RAD9AQ99638 391 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 IL25Q9H293 177 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 COG5Q9UP83 839 aa18.85■□□□□ 0.61
DDR1-229ENST00000396342 HAS3O00219 553 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 CAND2O75155 1236 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 LGR5O75473 907 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 CYFIP1Q7L576 1253 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 RSPH3Q86UC2 560 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 IGDCC4Q8TDY8 1250 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 SEPT8Q92599 483 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 PSTPIP2Q9H939 334 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 ANO2Q9NQ90 1003 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 RTEL1Q9NZ71 1219 aa18.84■□□□□ 0.61
DDR1-229ENST00000396342 CXCL10P02778 98 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 LGALS2P05162 132 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 HOXD8P13378 290 aaPredicted RBP18.83■□□□□ 0.6
DDR1-229ENST00000396342 ICAM3P32942 547 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 ZNF618Q5T7W0 954 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 PCNX4Q63HM2 1172 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 MB21D2Q8IYB1 491 aaPredicted RBP18.83■□□□□ 0.6
DDR1-229ENST00000396342 IL31RAQ8NI17 732 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 ADAMTS19Q8TE59 1207 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 INPP4AQ96PE3 977 aaPredicted RBP18.83■□□□□ 0.6
DDR1-229ENST00000396342 UHRF1Q96T88 793 aaPredicted RBP18.83■□□□□ 0.6
DDR1-229ENST00000396342 PRDM6Q9NQX0 595 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 LAMA4Q16363 1823 aa18.83■□□□□ 0.6
DDR1-229ENST00000396342 SPATA31C2B4DYI2 1134 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 CYTH3O43739 400 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 RGS20O76081 388 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 SMIM10L2AP0DMW4 78 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 SMIM10L2BP0DMW5 78 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 SP4Q02446 784 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 TAP1Q03518 808 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 UTP14CQ5TAP6 766 aaKnown RBP18.82■□□□□ 0.6
DDR1-229ENST00000396342 SERINC5Q86VE9 423 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 ZFP91Q96JP5 570 aaPredicted RBP18.82■□□□□ 0.6
DDR1-229ENST00000396342 TGS1Q96RS0 853 aaKnown RBP18.82■□□□□ 0.6
DDR1-229ENST00000396342 SENP7Q9BQF6 1050 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 LY9Q9HBG7 655 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 INSL6Q9Y581 213 aa18.82■□□□□ 0.6
DDR1-229ENST00000396342 PIK3CDO00329 1044 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 LIFRP42702 1097 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 FGD1P98174 961 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 FAM117BQ6P1L5 589 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 DHX38Q92620 1227 aaKnown RBP18.81■□□□□ 0.6
DDR1-229ENST00000396342 C16orf70Q9BSU1 422 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 MYL10Q9BUA6 226 aa18.81■□□□□ 0.6
DDR1-229ENST00000396342 LMCD1Q9NZU5 365 aa18.81■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms