RNA–Protein interactions for RNA: ENST00000395881.7

RTFDC1-203, Transcript of Protein RTF2 homolog, humanhuman

TSL 2 BASIC

Gene RTFDC1, Length 1,572 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-203ENST00000395881 BACE1P56817 501 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 IKQ13123 557 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 COBLL1Q53SF7 1204 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 TREML2Q5T2D2 321 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 CDKAL1Q5VV42 579 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 VSTM4Q8IW00 320 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 CTAGE1Q96RT6 745 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 BLZF1Q9H2G9 400 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 PYCARDQ9ULZ3 195 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 ADGRA2Q96PE1 1338 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 NRDCO43847 1150 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 CD44P16070 742 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 CASP1P29466 404 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 SREBF1P36956 1147 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 CAP1Q01518 475 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 SPAG1Q07617 926 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 MTMR2Q13614 643 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 KRT79Q5XKE5 535 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 FILIP1Q7Z7B0 1213 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 SLFN12Q8IYM2 578 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 PROCA1Q8NCQ7 364 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 ACER1Q8TDN7 264 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 NUP88Q99567 741 aaPredicted RBP16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 RANBP17Q9H2T7 1088 aaKnown RBP16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 KCNMB3Q9NPA1 279 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 FEM1BQ9UK73 627 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 AGTPBP1Q9UPW5 1226 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 STK24Q9Y6E0 443 aa16.17■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L15C9J2P7 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L13C9JLJ4 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L11C9JVI0 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L18D6R9N7 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L22D6RA61 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L17D6RBQ6 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L19D6RCP7 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L20D6RJB6 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 KLRC4O43908 158 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 CYP2C8P10632 490 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 CDK11BP21127 795 aaKnown RBP16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 CIITAP33076 1130 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L24Q0WX57 530 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 LRMPQ12912 555 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 PAK1Q13153 545 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 STIM1Q13586 685 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 Q4G0T1 1027 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 HYIQ5T013 277 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 USP17L6PQ6QN14 398 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 C17orf99Q6UX52 265 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 TMC6Q7Z403 805 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 GIMAP8Q8ND71 665 aaPredicted RBP16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 STAMQ92783 540 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 HAS1Q92839 578 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 TRIM9Q9C026 710 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 MCOLN1Q9GZU1 580 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 SLC45A1Q9Y2W3 748 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 KDM3AQ9Y4C1 1321 aa16.16■□□□□ 0.18
RTFDC1-203ENST00000395881 ZSWIM8A7E2V4 1837 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 A0A1B0GTH6 734 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 SPDYE3A6NKU9 549 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 C19orf81C9J6K1 198 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 CYP3A4P08684 503 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 SFPQP23246 707 aaKnown RBP eCLIP16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 ARHGAP4P98171 946 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 SP3Q02447 781 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 GRB10Q13322 594 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 TMEM119Q4V9L6 283 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 CTU1Q7Z7A3 348 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 TRMT44Q8IYL2 757 aaKnown RBP16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 ADSSL1Q8N142 457 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 CD99L2Q8TCZ2 262 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 LPAR1Q92633 364 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 NT5C3AQ9H0P0 336 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 CPA4Q9UI42 421 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 PCDHA12Q9UN75 941 aa16.15■□□□□ 0.18
RTFDC1-203ENST00000395881 PVALEFA0A1B0GWK0 134 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 LRRC10BA6NIK2 292 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 CCZ1BP86790 482 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 CCZ1P86791 482 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 KMT5BQ4FZB7 885 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 FAM83BQ5T0W9 1011 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 SV2BQ7L1I2 683 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 KCTD17Q8N5Z5 321 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 CCDC112Q8NEF3 446 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 DHTKD1Q96HY7 919 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 CDK5RAP3Q96JB5 506 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 NAP1L5Q96NT1 182 aaPredicted RBP16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 EMILIN3Q9NT22 766 aa16.14■□□□□ 0.17
RTFDC1-203ENST00000395881 SKILP12757 684 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 NR1I3Q14994 352 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 KIAA1755Q5JYT7 1200 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 APTXQ7Z2E3 356 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 SPICE1Q8N0Z3 855 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 LRRC15Q8TF66 581 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 NOC3LQ8WTT2 800 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 FAM20AQ96MK3 541 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 PNMA5Q96PV4 448 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 PARK7Q99497 189 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 SAMSN1Q9NSI8 373 aaKnown RBP16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 PNMA2Q9UL42 364 aa16.13■□□□□ 0.17
RTFDC1-203ENST00000395881 MRPL11Q9Y3B7 192 aaKnown RBP16.13■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms