RNA–Protein interactions for RNA: ENST00000395761.3

CXCL1-201, Transcript of C-X-C motif chemokine ligand 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL1, Length 1,097 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1-201ENST00000395761 SNX21Q969T3 373 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 KIAA1217Q5T5P2 1943 aa18.91■□□□□ 0.62
CXCL1-201ENST00000395761 A0A1W2PQ45 241 aaPredicted RBP18.9■□□□□ 0.62
CXCL1-201ENST00000395761 A0A1W2PQY0 241 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 M0R2N6 131 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 TGFB3P10600 412 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 UBA1P22314 1058 aaKnown RBP18.9■□□□□ 0.62
CXCL1-201ENST00000395761 ARHGAP4P98171 946 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 LRRC26Q2I0M4 334 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 KCNV1Q6PIU1 500 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 FAM177A1Q8N128 213 aaPredicted RBP18.9■□□□□ 0.62
CXCL1-201ENST00000395761 PCSK9Q8NBP7 692 aaKnown RBP18.9■□□□□ 0.62
CXCL1-201ENST00000395761 OXER1Q8TDS5 423 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 AFG1LQ8WV93 481 aa18.9■□□□□ 0.62
CXCL1-201ENST00000395761 TNRC18O15417 2968 aaPredicted RBP18.9■□□□□ 0.62
CXCL1-201ENST00000395761 MOXD2PA6NHM9 499 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 FIBPO43427 364 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 EDIL3O43854 480 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 XBP1P17861 261 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 CELF3Q5SZQ8 465 aaKnown RBP18.89■□□□□ 0.61
CXCL1-201ENST00000395761 MYSM1Q5VVJ2 828 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 MCTP2Q6DN12 878 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 GALNT17Q6IS24 598 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 CXCL17Q6UXB2 119 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 NLRX1Q86UT6 975 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 DHX37Q8IY37 1157 aaKnown RBP18.89■□□□□ 0.61
CXCL1-201ENST00000395761 DPF3Q92784 378 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 GPRASP2Q96D09 838 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 MXRA8Q9BRK3 442 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 HTATIP2Q9BUP3 242 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 JADE2Q9NQC1 790 aa18.89■□□□□ 0.61
CXCL1-201ENST00000395761 A6NJR5 290 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 ATP9AO75110 1047 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 GGPS1O95749 300 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 CYP3A4P08684 503 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 LAMC2Q13753 1193 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 CEP55Q53EZ4 464 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 KRT40Q6A162 431 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 SLC39A5Q6ZMH5 540 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 EMID1Q96A84 441 aaPredicted RBP18.88■□□□□ 0.61
CXCL1-201ENST00000395761 PKD2L1Q9P0L9 805 aa18.88■□□□□ 0.61
CXCL1-201ENST00000395761 RBM19Q9Y4C8 960 aaKnown RBP18.88■□□□□ 0.61
CXCL1-201ENST00000395761 FAM86B1E9PN63 330 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 ZEB2O60315 1214 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 MYL3P08590 195 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 FAM86B2P0C5J1 330 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 ARP10275 920 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 ZNF76P36508 570 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 CPT1AP50416 773 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 MTMR1Q13613 665 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 CYFIP1Q7L576 1253 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 VTI1AQ96AJ9 217 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 KCNH7Q9NS40 1196 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 TELO2Q9Y4R8 837 aa18.87■□□□□ 0.61
CXCL1-201ENST00000395761 MEIS1O00470 390 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 MMP3P08254 477 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 KCNA2P16389 499 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 PSMC6P62333 389 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 HMGN5P82970 282 aaKnown RBP18.86■□□□□ 0.61
CXCL1-201ENST00000395761 PURAQ00577 322 aaKnown RBP18.86■□□□□ 0.61
CXCL1-201ENST00000395761 NEDD9Q14511 834 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 TBCKQ8TEA7 893 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 GLT1D1Q96MS3 346 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 MLXIPQ9HAP2 919 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 STARD7Q9NQZ5 370 aa18.86■□□□□ 0.61
CXCL1-201ENST00000395761 IGLV3-22A0A075B6J6 115 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 RTP1P59025 263 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 GUCY1B3Q02153 619 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 NR5A1Q13285 461 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 SNX17Q15036 470 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 HSDL1Q3SXM5 330 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 BRDTQ58F21 947 aaPredicted RBP18.85■□□□□ 0.61
CXCL1-201ENST00000395761 EARS2Q5JPH6 523 aaKnown RBP18.85■□□□□ 0.61
CXCL1-201ENST00000395761 PPTC7Q8NI37 304 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 CDHR1Q96JP9 859 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 SPATA33Q96N06 139 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 UIMC1Q96RL1 719 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 SENP7Q9BQF6 1050 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 POLR3EQ9NVU0 708 aa18.85■□□□□ 0.61
CXCL1-201ENST00000395761 GRIN2DO15399 1336 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 ELP1O95163 1332 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 FAM205CA6NFA0 338 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 BTBD18B2RXH4 712 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 MAFGO15525 162 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 EVI5O60447 810 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 MMP1P03956 469 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 CIITAP33076 1130 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 KRT2P35908 639 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 USP11P51784 963 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 TRIM29Q14134 588 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 NONOQ15233 471 aaKnown RBP eCLIP18.84■□□□□ 0.61
CXCL1-201ENST00000395761 INF2Q27J81 1249 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 TRIM60Q495X7 471 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 METTL7BQ6UX53 244 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 NIPA1Q7RTP0 329 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 KRT25Q7Z3Z0 450 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 PLA2G4DQ86XP0 818 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 C7orf61Q8IZ16 206 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 FAM184AQ8NB25 1140 aa18.84■□□□□ 0.61
CXCL1-201ENST00000395761 TNFRSF25Q93038 417 aa18.84■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms